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Cluster: HRGMv2_1796_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1796_23 HRGMv2_1796_23_465 486482 488242 + 9.B.33.1.1
TF HRGMv2_1796_23 HRGMv2_1796_23_466 488257 488991 + LytTR
TF HRGMv2_1796_23 HRGMv2_1796_23_467 489007 489870 + HTH_AraC
TC HRGMv2_1796_23 HRGMv2_1796_23_468 490236 492731 - 4.A.2.1.11
peptidase HRGMv2_1796_23 HRGMv2_1796_23_469 492755 493795 - M42.008
peptidase HRGMv2_1796_23 HRGMv2_1796_23_470 493795 494880 - M24.039
TC HRGMv2_1796_23 HRGMv2_1796_23_471 494898 496145 - 4.A.2.1.11
TC HRGMv2_1796_23 HRGMv2_1796_23_472 496166 496492 - 4.A.2.1.11
STP HRGMv2_1796_23 HRGMv2_1796_23_473 496714 497679 - Glucokinase
TC HRGMv2_1796_23 HRGMv2_1796_23_474 497884 499119 + 2.A.49.7.1
pfam HRGMv2_1796_23 HRGMv2_1796_23_475 499120 500772 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC HRGMv2_1796_23 HRGMv2_1796_23_476 500955 501953 + 8.A.5.1.3
pfam HRGMv2_1796_23 HRGMv2_1796_23_477 502082 502411 + DUF2502
TC HRGMv2_1796_23 HRGMv2_1796_23_478 502814 504373 + 4.A.1.1.3
pfam HRGMv2_1796_23 HRGMv2_1796_23_479 504390 505742 + Lyase_1 | ADSL_C
CAZyme HRGMv2_1796_23 HRGMv2_1796_23_480 505735 506946 + CE9
NULL(UNKNOWN) HRGMv2_1796_23 HRGMv2_1796_23_481 506939 508486 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1796_23 HRGMv2_1796_23_482 508570 509808 - 2.A.55.3.1
TC HRGMv2_1796_23 HRGMv2_1796_23_483 510153 511355 + 2.A.41.1.1
Gene ID: HRGMv2_1796_23_465
Type: TC
Location: 486482 - 488242 (+)
Gene ID: HRGMv2_1796_23_466
Type: TF
Location: 488257 - 488991 (+)
Gene ID: HRGMv2_1796_23_467
Type: TF
Location: 489007 - 489870 (+)
Gene ID: HRGMv2_1796_23_468
Type: TC
Location: 490236 - 492731 (-)
Gene ID: HRGMv2_1796_23_469
Type: peptidase
Location: 492755 - 493795 (-)
Gene ID: HRGMv2_1796_23_470
Type: peptidase
Location: 493795 - 494880 (-)
Gene ID: HRGMv2_1796_23_471
Type: TC
Location: 494898 - 496145 (-)
Gene ID: HRGMv2_1796_23_472
Type: TC
Location: 496166 - 496492 (-)
Gene ID: HRGMv2_1796_23_473
Type: STP
Location: 496714 - 497679 (-)
Gene ID: HRGMv2_1796_23_474
Type: TC
Location: 497884 - 499119 (+)
Gene ID: HRGMv2_1796_23_475
Type: pfam
Location: 499120 - 500772 (-)
Gene ID: HRGMv2_1796_23_476
Type: TC
Location: 500955 - 501953 (+)
Gene ID: HRGMv2_1796_23_477
Type: pfam
Location: 502082 - 502411 (+)
Gene ID: HRGMv2_1796_23_478
Type: TC
Location: 502814 - 504373 (+)
Gene ID: HRGMv2_1796_23_479
Type: pfam
Location: 504390 - 505742 (+)
Gene ID: HRGMv2_1796_23_480
Type: CAZyme
Location: 505735 - 506946 (+)
Gene ID: HRGMv2_1796_23_481
Type:
Location: 506939 - 508486 (-)
Gene ID: HRGMv2_1796_23_482
Type: TC
Location: 508570 - 509808 (-)
Gene ID: HRGMv2_1796_23_483
Type: TC
Location: 510153 - 511355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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