dbCAN Logo

Cluster: HRGMv2_1796_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_46 53374 54708 - GT2
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_47 54705 56726 - CE4 | GH153
TC HRGMv2_1796_8 HRGMv2_1796_8_48 56736 59198 - 1.B.55.1.1
pfam HRGMv2_1796_8 HRGMv2_1796_8_49 60160 60696 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_6 | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_1796_8 HRGMv2_1796_8_50 60925 62907 - TPR_14 | TPR_16 | TPR_19 | TPR_19
TC HRGMv2_1796_8 HRGMv2_1796_8_51 62927 64231 - 8.A.4.2.2
TC HRGMv2_1796_8 HRGMv2_1796_8_52 64254 64949 - 3.A.1.101.2
TC HRGMv2_1796_8 HRGMv2_1796_8_53 64975 65769 - 3.A.1.101.2
TC HRGMv2_1796_8 HRGMv2_1796_8_54 65779 66846 - 1.B.18.2.1
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_55 66892 68628 - GT4
Gene ID: HRGMv2_1796_8_46
Type: CAZyme
Location: 53374 - 54708 (-)
Gene ID: HRGMv2_1796_8_47
Type: CAZyme
Location: 54705 - 56726 (-)
Gene ID: HRGMv2_1796_8_48
Type: TC
Location: 56736 - 59198 (-)
Gene ID: HRGMv2_1796_8_49
Type: pfam
Location: 60160 - 60696 (+)
Gene ID: HRGMv2_1796_8_50
Type: pfam
Location: 60925 - 62907 (-)
Gene ID: HRGMv2_1796_8_51
Type: TC
Location: 62927 - 64231 (-)
Gene ID: HRGMv2_1796_8_52
Type: TC
Location: 64254 - 64949 (-)
Gene ID: HRGMv2_1796_8_53
Type: TC
Location: 64975 - 65769 (-)
Gene ID: HRGMv2_1796_8_54
Type: TC
Location: 65779 - 66846 (-)
Gene ID: HRGMv2_1796_8_55
Type: CAZyme
Location: 66892 - 68628 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List