dbCAN Logo

Cluster: HRGMv2_1796_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1796_8 HRGMv2_1796_8_314 345443 345916 + 4.A.6.1.4
TC HRGMv2_1796_8 HRGMv2_1796_8_315 345927 346706 + 4.A.6.1.4
TC HRGMv2_1796_8 HRGMv2_1796_8_316 346696 347574 + 4.A.6.1.4
TC HRGMv2_1796_8 HRGMv2_1796_8_317 347591 348025 + 4.A.6.1.6
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_318 348022 349155 + CE9
STP HRGMv2_1796_8 HRGMv2_1796_8_319 349457 350611 + SIS | SIS
pfam HRGMv2_1796_8 HRGMv2_1796_8_320 350624 351499 + F_bP_aldolase
TC HRGMv2_1796_8 HRGMv2_1796_8_321 351685 352161 + 4.A.6.1.5
TC HRGMv2_1796_8 HRGMv2_1796_8_322 352216 353016 + 4.A.6.1.5
TC HRGMv2_1796_8 HRGMv2_1796_8_323 353006 353797 + 4.A.6.1.5
Gene ID: HRGMv2_1796_8_314
Type: TC
Location: 345443 - 345916 (+)
Gene ID: HRGMv2_1796_8_315
Type: TC
Location: 345927 - 346706 (+)
Gene ID: HRGMv2_1796_8_316
Type: TC
Location: 346696 - 347574 (+)
Gene ID: HRGMv2_1796_8_317
Type: TC
Location: 347591 - 348025 (+)
Gene ID: HRGMv2_1796_8_318
Type: CAZyme
Location: 348022 - 349155 (+)
Gene ID: HRGMv2_1796_8_319
Type: STP
Location: 349457 - 350611 (+)
Gene ID: HRGMv2_1796_8_320
Type: pfam
Location: 350624 - 351499 (+)
Gene ID: HRGMv2_1796_8_321
Type: TC
Location: 351685 - 352161 (+)
Gene ID: HRGMv2_1796_8_322
Type: TC
Location: 352216 - 353016 (+)
Gene ID: HRGMv2_1796_8_323
Type: TC
Location: 353006 - 353797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List