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Cluster: HRGMv2_1796_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1796_10 HRGMv2_1796_10_38 39787 41217 - 2.A.25.1.10
pfam HRGMv2_1796_10 HRGMv2_1796_10_39 41492 42445 + TAL_FSA
pfam HRGMv2_1796_10 HRGMv2_1796_10_40 42556 43143 + MoCF_biosynth
TC HRGMv2_1796_10 HRGMv2_1796_10_41 43268 44575 + 3.A.7.9.1
TC HRGMv2_1796_10 HRGMv2_1796_10_42 44610 45176 - 2.A.96.1.1
TC HRGMv2_1796_10 HRGMv2_1796_10_43 45788 47710 + 1.A.33.1.2
pfam HRGMv2_1796_10 HRGMv2_1796_10_44 47796 48929 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC HRGMv2_1796_10 HRGMv2_1796_10_45 49139 50305 + 2.A.33.1.1
TF HRGMv2_1796_10 HRGMv2_1796_10_46 50344 51243 + HTH_1
NULL(UNKNOWN) HRGMv2_1796_10 HRGMv2_1796_10_47 51597 52184 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1796_10 HRGMv2_1796_10_48 52135 53079 + GH18
Gene ID: HRGMv2_1796_10_38
Type: TC
Location: 39787 - 41217 (-)
Gene ID: HRGMv2_1796_10_39
Type: pfam
Location: 41492 - 42445 (+)
Gene ID: HRGMv2_1796_10_40
Type: pfam
Location: 42556 - 43143 (+)
Gene ID: HRGMv2_1796_10_41
Type: TC
Location: 43268 - 44575 (+)
Gene ID: HRGMv2_1796_10_42
Type: TC
Location: 44610 - 45176 (-)
Gene ID: HRGMv2_1796_10_43
Type: TC
Location: 45788 - 47710 (+)
Gene ID: HRGMv2_1796_10_44
Type: pfam
Location: 47796 - 48929 (+)
Gene ID: HRGMv2_1796_10_45
Type: TC
Location: 49139 - 50305 (+)
Gene ID: HRGMv2_1796_10_46
Type: TF
Location: 50344 - 51243 (+)
Gene ID: HRGMv2_1796_10_47
Type:
Location: 51597 - 52184 (+)
Gene ID: HRGMv2_1796_10_48
Type: CAZyme
Location: 52135 - 53079 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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