dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_0525
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola sp900546645
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0525 3,218,550 98.43% 0% Japan Asia HRGM
MGYG000003163 2,819,390 92.56% 0.87% United States North America UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0525_CGC8 CGCFAM_00002 Yes 4 2
HRGMv2_0525_CGC25 CGCFAM_00013 Yes 5 1
HRGMv2_0525_CGC1 CGCFAM_00015 Yes 5 3
HRGMv2_0525_CGC37 CGCFAM_00025 Yes 6 3 pectin/alpha-glucan
HRGMv2_0525_CGC39 CGCFAM_00028 Yes 4 3
HRGMv2_0525_CGC14 CGCFAM_00048 Yes 8 2
HRGMv2_0525_CGC31 CGCFAM_00116 Yes 7 1 xylan/beta-glucan
HRGMv2_0525_CGC28 CGCFAM_00197 Yes 7 2
HRGMv2_0525_CGC36 CGCFAM_00304 Yes 5 1
HRGMv2_0525_CGC6 CGCFAM_00316 Yes 11 4
HRGMv2_0525_CGC23 CGCFAM_00360 Yes 8 3 host glycan
HRGMv2_0525_CGC26 CGCFAM_00595 Yes 7 2
HRGMv2_0525_CGC30 CGCFAM_00630 Yes 3 1
HRGMv2_0525_CGC16 CGCFAM_00829 Yes 8 3
HRGMv2_0525_CGC27 CGCFAM_01059 Yes 4 2
HRGMv2_0525_CGC29 CGCFAM_01122 Yes 5 4
HRGMv2_0525_CGC3 CGCFAM_01223 Yes 5 1
HRGMv2_0525_CGC10 CGCFAM_01309 Yes 9 3
HRGMv2_0525_CGC32 CGCFAM_01329 Yes 5 1
HRGMv2_0525_CGC38 CGCFAM_01844 Yes 6 1
HRGMv2_0525_CGC9 CGCFAM_02301 Yes 10 4
HRGMv2_0525_CGC12 CGCFAM_02373 Yes 7 1
HRGMv2_0525_CGC24 CGCFAM_04250 Yes 9 2
HRGMv2_0525_CGC33 CGCFAM_04399 Yes 6 1
HRGMv2_0525_CGC40 CGCFAM_05491 Yes 4 2
Top CAZyme Families