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Cluster: HRGMv2_0525_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0525_27 HRGMv2_0525_27_23 21816 23195 + GH23
TF HRGMv2_0525_27 HRGMv2_0525_27_24 23264 23965 - 0038753
pfam HRGMv2_0525_27 HRGMv2_0525_27_25 24061 26280 + DUF5686
CAZyme HRGMv2_0525_27 HRGMv2_0525_27_26 26320 27480 - GT2
pfam HRGMv2_0525_27 HRGMv2_0525_27_27 27553 28713 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam HRGMv2_0525_27 HRGMv2_0525_27_28 28859 30178 - AA_kinase | ACT_9
TC HRGMv2_0525_27 HRGMv2_0525_27_29 30309 30986 - 3.A.1.140.1
Gene ID: HRGMv2_0525_27_23
Type: CAZyme
Location: 21816 - 23195 (+)
Gene ID: HRGMv2_0525_27_24
Type: TF
Location: 23264 - 23965 (-)
Gene ID: HRGMv2_0525_27_25
Type: pfam
Location: 24061 - 26280 (+)
Gene ID: HRGMv2_0525_27_26
Type: CAZyme
Location: 26320 - 27480 (-)
Gene ID: HRGMv2_0525_27_27
Type: pfam
Location: 27553 - 28713 (-)
Gene ID: HRGMv2_0525_27_28
Type: pfam
Location: 28859 - 30178 (-)
Gene ID: HRGMv2_0525_27_29
Type: TC
Location: 30309 - 30986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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