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Cluster: HRGMv2_0525_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_6 HRGMv2_0525_6_41 49994 50650 + 2.A.6.2.31
NULL(UNKNOWN) HRGMv2_0525_6 HRGMv2_0525_6_42 50647 51141 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0525_6 HRGMv2_0525_6_43 51154 54303 + 2.A.6.2.25
TC HRGMv2_0525_6 HRGMv2_0525_6_44 54368 55720 + 2.A.6.2.42
CAZyme HRGMv2_0525_6 HRGMv2_0525_6_45 55796 56785 - GH109
STP HRGMv2_0525_6 HRGMv2_0525_6_46 56881 57690 - SBP_bac_3
TC HRGMv2_0525_6 HRGMv2_0525_6_47 57703 59757 - 1.B.14.15.2
Gene ID: HRGMv2_0525_6_41
Type: TC
Location: 49994 - 50650 (+)
Gene ID: HRGMv2_0525_6_42
Type:
Location: 50647 - 51141 (+)
Gene ID: HRGMv2_0525_6_43
Type: TC
Location: 51154 - 54303 (+)
Gene ID: HRGMv2_0525_6_44
Type: TC
Location: 54368 - 55720 (+)
Gene ID: HRGMv2_0525_6_45
Type: CAZyme
Location: 55796 - 56785 (-)
Gene ID: HRGMv2_0525_6_46
Type: STP
Location: 56881 - 57690 (-)
Gene ID: HRGMv2_0525_6_47
Type: TC
Location: 57703 - 59757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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