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Cluster: HRGMv2_0525_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_49 62186 63163 - GH16_3
pfam HRGMv2_0525_5 HRGMv2_0525_5_50 63523 64893 - DUF4988
pfam HRGMv2_0525_5 HRGMv2_0525_5_51 64922 66865 - DUF5006 | DUF5014
TC HRGMv2_0525_5 HRGMv2_0525_5_52 66978 68786 - 8.A.46.1.3
TC HRGMv2_0525_5 HRGMv2_0525_5_53 68799 72110 - 1.B.14.6.1
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_54 72452 73987 - GH109
sulfatase HRGMv2_0525_5 HRGMv2_0525_5_55 74470 76047 + S1_11
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_56 76083 78416 + GH20
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_57 78495 82097 + GH2
TC HRGMv2_0525_5 HRGMv2_0525_5_58 82694 85183 - 9.B.144.1.4
Gene ID: HRGMv2_0525_5_49
Type: CAZyme
Location: 62186 - 63163 (-)
Gene ID: HRGMv2_0525_5_50
Type: pfam
Location: 63523 - 64893 (-)
Gene ID: HRGMv2_0525_5_51
Type: pfam
Location: 64922 - 66865 (-)
Gene ID: HRGMv2_0525_5_52
Type: TC
Location: 66978 - 68786 (-)
Gene ID: HRGMv2_0525_5_53
Type: TC
Location: 68799 - 72110 (-)
Gene ID: HRGMv2_0525_5_54
Type: CAZyme
Location: 72452 - 73987 (-)
Gene ID: HRGMv2_0525_5_55
Type: sulfatase
Location: 74470 - 76047 (+)
Gene ID: HRGMv2_0525_5_56
Type: CAZyme
Location: 76083 - 78416 (+)
Gene ID: HRGMv2_0525_5_57
Type: CAZyme
Location: 78495 - 82097 (+)
Gene ID: HRGMv2_0525_5_58
Type: TC
Location: 82694 - 85183 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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