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Cluster: HRGMv2_0525_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_21 HRGMv2_0525_21_26 29171 30403 + 2.A.1.14.14
pfam HRGMv2_0525_21 HRGMv2_0525_21_27 30443 30889 + DUF386
CAZyme HRGMv2_0525_21 HRGMv2_0525_21_28 30901 32526 + CBM93 | GH33
TC HRGMv2_0525_21 HRGMv2_0525_21_29 32913 36251 + 1.B.14.6.1
TC HRGMv2_0525_21 HRGMv2_0525_21_30 36265 37833 + 8.A.46.1.4
CAZyme HRGMv2_0525_21 HRGMv2_0525_21_31 37933 39945 + GH20
sulfatase HRGMv2_0525_21 HRGMv2_0525_21_32 39969 40631 + S1_16
CAZyme HRGMv2_0525_21 HRGMv2_0525_21_33 40628 42703 + CE20
Gene ID: HRGMv2_0525_21_26
Type: TC
Location: 29171 - 30403 (+)
Gene ID: HRGMv2_0525_21_27
Type: pfam
Location: 30443 - 30889 (+)
Gene ID: HRGMv2_0525_21_28
Type: CAZyme
Location: 30901 - 32526 (+)
Gene ID: HRGMv2_0525_21_29
Type: TC
Location: 32913 - 36251 (+)
Gene ID: HRGMv2_0525_21_30
Type: TC
Location: 36265 - 37833 (+)
Gene ID: HRGMv2_0525_21_31
Type: CAZyme
Location: 37933 - 39945 (+)
Gene ID: HRGMv2_0525_21_32
Type: sulfatase
Location: 39969 - 40631 (+)
Gene ID: HRGMv2_0525_21_33
Type: CAZyme
Location: 40628 - 42703 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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