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Cluster: HRGMv2_0525_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_5 HRGMv2_0525_5_66 93619 95058 - 2.A.50.2.1
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_67 95081 96091 - GT90
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_68 96202 97137 + GT8
pfam HRGMv2_0525_5 HRGMv2_0525_5_69 97134 97931 + DUF5672
CAZyme HRGMv2_0525_5 HRGMv2_0525_5_70 98038 99012 - GT2
NULL(UNKNOWN) HRGMv2_0525_5 HRGMv2_0525_5_71 99014 100045 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0525_5 HRGMv2_0525_5_72 100057 100971 - Lip_A_acyltrans
TC HRGMv2_0525_5 HRGMv2_0525_5_73 101158 102999 + 3.A.1.106.2
TC HRGMv2_0525_5 HRGMv2_0525_5_74 103159 105045 - 1.I.1.1.3
Gene ID: HRGMv2_0525_5_66
Type: TC
Location: 93619 - 95058 (-)
Gene ID: HRGMv2_0525_5_67
Type: CAZyme
Location: 95081 - 96091 (-)
Gene ID: HRGMv2_0525_5_68
Type: CAZyme
Location: 96202 - 97137 (+)
Gene ID: HRGMv2_0525_5_69
Type: pfam
Location: 97134 - 97931 (+)
Gene ID: HRGMv2_0525_5_70
Type: CAZyme
Location: 98038 - 99012 (-)
Gene ID: HRGMv2_0525_5_71
Type:
Location: 99014 - 100045 (-)
Gene ID: HRGMv2_0525_5_72
Type: pfam
Location: 100057 - 100971 (-)
Gene ID: HRGMv2_0525_5_73
Type: TC
Location: 101158 - 102999 (+)
Gene ID: HRGMv2_0525_5_74
Type: TC
Location: 103159 - 105045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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