PROTEIN: HRGMv2_0525_5_71
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Protein File & Metadata
Source:
HRGMv2_0525_5_71.pdb
Genome ID:
Protein ID:
HRGMv2_0525_5_71
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Protein Sequence
MKKLRDISKV YVFSPWGKTT GGIELLHQLV DYLRNQHLEA YIYYYENPFA RIPEVYNKYN 60 IVTATQVDDA FGSVLVLPEI CFHVSAYYKA SQIVLWWLSV DNYYHRETKH IPLYEIYSYS 120 KIYGMKQLWH RLMRLFKLQW TVKPAFSIKK AIEKAYIHAY QSEYANLHLQ HRGVVELYPL 180 KDYINTAFVS ESACQKREPN ILYNPKKGIK FTRKLIKVAP DLKFIPLQNL SRAELQYLFA 240 TSMLYIDFGN HPGMDRLPRE ATVNGCCIIT GMQGAAANEV DISIPCSYKF DESETSVEVI 300 IRRIREVLTD YDSHSKAFEP YKRRIMGEKR EFYRQIDELF QLR 343
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05083-F1-model_v4 | 7 | 340 | 1 | 353 | 0.7257 |
0.7742 |
| AF-K0F1D2-F1-model_v4 | 6 | 343 | 3 | 368 | 0.7141 |
0.7691 |
| AF-K0EVT3-F1-model_v4 | 5 | 343 | 2 | 377 | 0.7108 |
0.777 |
| AF-K0EX89-F1-model_v4 | 8 | 343 | 1 | 365 | 0.7004 |
0.7574 |
| AF-K0F8N2-F1-model_v4 | 7 | 343 | 1 | 387 | 0.6991 |
0.7726 |
| AF-P96407-F1-model_v4 | 5 | 342 | 2 | 373 | 0.699 |
0.7662 |
| AF-F4IBV4-F1-model_v4 | 6 | 343 | 7 | 398 | 0.696 |
0.7789 |
| AF-K0F8H2-F1-model_v4 | 7 | 343 | 1 | 375 | 0.6927 |
0.7595 |
| AF-A0A044SN82-F1-model_v4 | 8 | 343 | 1 | 400 | 0.6923 |
0.7861 |
| AF-Q7APT7-F1-model_v4 | 4 | 343 | 5 | 393 | 0.6923 |
0.7633 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5B9EAL0-F1-model_v4 | GT4 | 5 | 342 | 1 | 317 | 0.7847 |
0.8415 |
| AF-E6VVQ0-F1-model_v4 | GT4 | 5 | 343 | 1 | 330 | 0.78 |
0.8127 |
| AF-K9TQ93-F1-model_v4 | GT4 | 5 | 342 | 9 | 323 | 0.7771 |
0.8471 |
| A0A9J7AP56 | GT4 | 7 | 343 | 1 | 311 | 0.776 |
0.8334 |
| AF-F0JHA4-F1-model_v4 | GT4 | 7 | 343 | 1 | 328 | 0.7744 |
0.8097 |
| AF-A0A126QIT1-F1-model_v4 | GT4 | 7 | 343 | 1 | 328 | 0.7737 |
0.809 |
| AF-K9XLA5-F1-model_v4 | GT4 | 5 | 343 | 1 | 320 | 0.7735 |
0.8231 |
| AF-A0A7G8GHC0-F1-model_v4 | GT4 | 5 | 342 | 3 | 331 | 0.7733 |
0.8169 |
| AF-A0A6H2CYB0-F1-model_v4 | GT4 | 8 | 343 | 1 | 331 | 0.7726 |
0.8039 |
| AF-A0A6I6J932-F1-model_v4 | GT4 | 7 | 343 | 1 | 331 | 0.7716 |
0.803 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B9EAL0 | GT4 | 5 | 342 | 1 | 317 | 0.7847 |
0.8415 |
| K9TQ93 | GT4 | 5 | 342 | 9 | 323 | 0.7771 |
0.8471 |
| A0A127JYY5 | GT4 | 7 | 343 | 1 | 310 | 0.7771 |
0.8362 |
| A0A9J7AP56 | GT4 | 7 | 343 | 1 | 311 | 0.776 |
0.8334 |
| K9XLA5 | GT4 | 5 | 343 | 1 | 320 | 0.7735 |
0.8231 |
| A0A7U7J0M3 | GT4 | 6 | 343 | 1 | 319 | 0.7706 |
0.817 |
| M1WK82 | GT4 | 7 | 343 | 1 | 331 | 0.7695 |
0.8013 |
| UYW01545.1 | GT4 | 7 | 343 | 1 | 341 | 0.7667 |
0.7944 |
| A0A0P0YIJ8 | GT4 | 8 | 343 | 1 | 316 | 0.7666 |
0.8264 |
| A0A6P1NKI5 | GT4 | 7 | 343 | 1 | 318 | 0.7662 |
0.8227 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qsg-assembly1.cif.gz_A | 7 | 342 | 3 | 376 | 0.6909 |
0.7581 |
| 6n1x-assembly1.cif.gz_A | 4 | 342 | 1 | 373 | 0.6815 |
0.7414 |
| 5d00-assembly1.cif.gz_B | 6 | 343 | 1 | 361 | 0.6739 |
0.7205 |
| 3mbo-assembly3.cif.gz_F | 7 | 342 | 1 | 364 | 0.6705 |
0.728 |
| 5d00-assembly1.cif.gz_A | 6 | 342 | 1 | 358 | 0.669 |
0.7169 |
| 5d01-assembly1.cif.gz_A | 6 | 342 | 1 | 355 | 0.6657 |
0.7101 |
| 2x0f-assembly1.cif.gz_B | 6 | 342 | 20 | 381 | 0.665 |
0.7321 |
| 2x0f-assembly1.cif.gz_A | 6 | 342 | 18 | 376 | 0.6627 |
0.7254 |
| 2gek-assembly1.cif.gz_A | 8 | 342 | 1 | 350 | 0.6623 |
0.7166 |
| 3qkw-assembly1.cif.gz_B | 6 | 342 | 1 | 323 | 0.6601 |
0.7044 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B3H2N1-F1-model_v4 | 5 | 343 | 4 | 326 | 0.7642 |
0.8141 |
| AF-O05083-F1-model_v4 | 7 | 340 | 1 | 353 | 0.7257 |
0.7742 |
| AF-Q4JAK2-F1-model_v4 | 6 | 343 | 1 | 352 | 0.7241 |
0.7633 |
| AF-P9WMY4-F1-model_v4 | 6 | 342 | 3 | 368 | 0.6907 |
0.7555 |
| AF-A0QRG8-F1-model_v4 | 7 | 343 | 1 | 372 | 0.6897 |
0.7525 |
| AF-P9WMY5-F1-model_v4 | 6 | 342 | 3 | 368 | 0.6886 |
0.7535 |
| AF-A5U3B9-F1-model_v4 | 8 | 343 | 1 | 370 | 0.6829 |
0.7522 |
| AF-P0CF99-F1-model_v4 | 8 | 343 | 1 | 370 | 0.6828 |
0.7521 |
| AF-P71237-F1-model_v4 | 7 | 343 | 1 | 405 | 0.681 |
0.7692 |
| AF-Q59002-F1-model_v4 | 7 | 342 | 1 | 383 | 0.6772 |
0.7528 |