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Cluster: HRGMv2_0525_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_22 HRGMv2_0525_22_28 26047 26613 - 2.A.51.1.6
TC HRGMv2_0525_22 HRGMv2_0525_22_29 26626 27174 - 2.A.51.1.6
TF HRGMv2_0525_22 HRGMv2_0525_22_30 27188 31105 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0525_22 HRGMv2_0525_22_31 31378 33726 + GH20
CAZyme HRGMv2_0525_22 HRGMv2_0525_22_32 33732 35792 + GH20
TC HRGMv2_0525_22 HRGMv2_0525_22_33 36256 39303 + 1.B.14.6.13
TC HRGMv2_0525_22 HRGMv2_0525_22_34 39317 41104 + 8.A.46.2.1
peptidase HRGMv2_0525_22 HRGMv2_0525_22_35 41462 45166 - C56.972
TC HRGMv2_0525_22 HRGMv2_0525_22_36 45303 45962 + 2.A.76.1.6
Gene ID: HRGMv2_0525_22_28
Type: TC
Location: 26047 - 26613 (-)
Gene ID: HRGMv2_0525_22_29
Type: TC
Location: 26626 - 27174 (-)
Gene ID: HRGMv2_0525_22_30
Type: TF
Location: 27188 - 31105 (-)
Gene ID: HRGMv2_0525_22_31
Type: CAZyme
Location: 31378 - 33726 (+)
Gene ID: HRGMv2_0525_22_32
Type: CAZyme
Location: 33732 - 35792 (+)
Gene ID: HRGMv2_0525_22_33
Type: TC
Location: 36256 - 39303 (+)
Gene ID: HRGMv2_0525_22_34
Type: TC
Location: 39317 - 41104 (+)
Gene ID: HRGMv2_0525_22_35
Type: peptidase
Location: 41462 - 45166 (-)
Gene ID: HRGMv2_0525_22_36
Type: TC
Location: 45303 - 45962 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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