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Cluster: HRGMv2_0525_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_24 HRGMv2_0525_24_10 12503 15613 + 1.B.14.6.1
TC HRGMv2_0525_24 HRGMv2_0525_24_11 15632 17188 + 8.A.46.1.3
pfam HRGMv2_0525_24 HRGMv2_0525_24_12 17319 17597 + Lys_export
TC HRGMv2_0525_24 HRGMv2_0525_24_13 17594 18196 + 2.A.124.1.2
CAZyme HRGMv2_0525_24 HRGMv2_0525_24_14 18212 21379 + GH2
CAZyme HRGMv2_0525_24 HRGMv2_0525_24_15 21469 23397 + GH63
TC HRGMv2_0525_24 HRGMv2_0525_24_16 23614 25269 - 2.A.1.42.2
Gene ID: HRGMv2_0525_24_10
Type: TC
Location: 12503 - 15613 (+)
Gene ID: HRGMv2_0525_24_11
Type: TC
Location: 15632 - 17188 (+)
Gene ID: HRGMv2_0525_24_12
Type: pfam
Location: 17319 - 17597 (+)
Gene ID: HRGMv2_0525_24_13
Type: TC
Location: 17594 - 18196 (+)
Gene ID: HRGMv2_0525_24_14
Type: CAZyme
Location: 18212 - 21379 (+)
Gene ID: HRGMv2_0525_24_15
Type: CAZyme
Location: 21469 - 23397 (+)
Gene ID: HRGMv2_0525_24_16
Type: TC
Location: 23614 - 25269 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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