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Cluster: HRGMv2_0525_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_8 HRGMv2_0525_8_27 32826 35204 - 1.B.14.3.1
STP HRGMv2_0525_8 HRGMv2_0525_8_28 35372 37624 - HD
CAZyme HRGMv2_0525_8 HRGMv2_0525_8_29 37727 38968 - GH23
pfam HRGMv2_0525_8 HRGMv2_0525_8_30 38974 39759 - DUF5683
pfam HRGMv2_0525_8 HRGMv2_0525_8_31 39771 40667 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_0525_8 HRGMv2_0525_8_32 40672 41439 - 8.A.3.2.3
pfam HRGMv2_0525_8 HRGMv2_0525_8_33 41654 42424 + SurE
CAZyme HRGMv2_0525_8 HRGMv2_0525_8_34 42421 43560 + GT19
Gene ID: HRGMv2_0525_8_27
Type: TC
Location: 32826 - 35204 (-)
Gene ID: HRGMv2_0525_8_28
Type: STP
Location: 35372 - 37624 (-)
Gene ID: HRGMv2_0525_8_29
Type: CAZyme
Location: 37727 - 38968 (-)
Gene ID: HRGMv2_0525_8_30
Type: pfam
Location: 38974 - 39759 (-)
Gene ID: HRGMv2_0525_8_31
Type: pfam
Location: 39771 - 40667 (-)
Gene ID: HRGMv2_0525_8_32
Type: TC
Location: 40672 - 41439 (-)
Gene ID: HRGMv2_0525_8_33
Type: pfam
Location: 41654 - 42424 (+)
Gene ID: HRGMv2_0525_8_34
Type: CAZyme
Location: 42421 - 43560 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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