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Cluster: HRGMv2_0525_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_9 HRGMv2_0525_9_20 30392 33436 - 1.B.14.6.1
CAZyme HRGMv2_0525_9 HRGMv2_0525_9_21 33480 35918 - GH127
CAZyme HRGMv2_0525_9 HRGMv2_0525_9_22 36120 37862 - GH146
pfam HRGMv2_0525_9 HRGMv2_0525_9_23 37973 38455 - Beta-AFase-like_GH127_cat
CAZyme HRGMv2_0525_9 HRGMv2_0525_9_24 38469 39680 - GH27
pfam HRGMv2_0525_9 HRGMv2_0525_9_25 39969 41369 - DUF6055
pfam HRGMv2_0525_9 HRGMv2_0525_9_26 41389 43137 - SusD_RagB | SusD-like_3
TC HRGMv2_0525_9 HRGMv2_0525_9_27 43162 46338 - 1.B.14.6.1
Gene ID: HRGMv2_0525_9_20
Type: TC
Location: 30392 - 33436 (-)
Gene ID: HRGMv2_0525_9_21
Type: CAZyme
Location: 33480 - 35918 (-)
Gene ID: HRGMv2_0525_9_22
Type: CAZyme
Location: 36120 - 37862 (-)
Gene ID: HRGMv2_0525_9_23
Type: pfam
Location: 37973 - 38455 (-)
Gene ID: HRGMv2_0525_9_24
Type: CAZyme
Location: 38469 - 39680 (-)
Gene ID: HRGMv2_0525_9_25
Type: pfam
Location: 39969 - 41369 (-)
Gene ID: HRGMv2_0525_9_26
Type: pfam
Location: 41389 - 43137 (-)
Gene ID: HRGMv2_0525_9_27
Type: TC
Location: 43162 - 46338 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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