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Genome Details

Selected Rep_genome_ID: HRGMv2_0320
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides ndongoniae
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0320 3,902,470 95.17% 0.185% UK Europe HRGM
MGYG000002621 3,633,256 90.35% 0% China Asia UHGG
Rep_537 4,520,007 98.8848% 2.10657% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0320_CGC5 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0320_CGC12 CGCFAM_00003 Yes 11 3
HRGMv2_0320_CGC1 CGCFAM_00030 Yes 3 2
HRGMv2_0320_CGC13 CGCFAM_00039 Yes 6 2
HRGMv2_0320_CGC25 CGCFAM_00061 Yes 6 2
HRGMv2_0320_CGC44 CGCFAM_00065 Yes 6 5
HRGMv2_0320_CGC34 CGCFAM_00069 Yes 6 2
HRGMv2_0320_CGC53 CGCFAM_00077 Yes 7 2
HRGMv2_0320_CGC59 CGCFAM_00077 Yes 6 1
HRGMv2_0320_CGC30 CGCFAM_00095 Yes 3 2
HRGMv2_0320_CGC48 CGCFAM_00110 Yes 5 3 pectin/host glycan
HRGMv2_0320_CGC43 CGCFAM_00118 Yes 10 3
HRGMv2_0320_CGC60 CGCFAM_00143 Yes 7 1
HRGMv2_0320_CGC42 CGCFAM_00170 Yes 10 4
HRGMv2_0320_CGC40 CGCFAM_00217 Yes 23 14
HRGMv2_0320_CGC32 CGCFAM_00229 Yes 6 1
HRGMv2_0320_CGC38 CGCFAM_00273 Yes 14 12 xylan
HRGMv2_0320_CGC33 CGCFAM_00297 Yes 7 1
HRGMv2_0320_CGC37 CGCFAM_00320 Yes 6 1
HRGMv2_0320_CGC50 CGCFAM_00337 Yes 12 5
HRGMv2_0320_CGC7 CGCFAM_00406 Yes 7 1
HRGMv2_0320_CGC16 CGCFAM_00439 Yes 6 2 host glycan
HRGMv2_0320_CGC20 CGCFAM_00525 Yes 5 3
HRGMv2_0320_CGC21 CGCFAM_00676 Yes 11 5
HRGMv2_0320_CGC17 CGCFAM_00913 Yes 6 1
Top CAZyme Families