Genome Details
Selected Rep_genome_ID: HRGMv2_0320
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ndongoniae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0320 | 3,902,470 | 95.17% | 0.185% | UK | Europe | HRGM |
| MGYG000002621 | 3,633,256 | 90.35% | 0% | China | Asia | UHGG |
| Rep_537 | 4,520,007 | 98.8848% | 2.10657% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0320_CGC55 | CGCFAM_01788 | Yes | 5 | 2 | |
| HRGMv2_0320_CGC11 | CGCFAM_02240 | Yes | 5 | 1 | |
| HRGMv2_0320_CGC47 | CGCFAM_02709 | Yes | 5 | 1 | |
| HRGMv2_0320_CGC57 | CGCFAM_02990 | Yes | 3 | 1 | |
| HRGMv2_0320_CGC19 | CGCFAM_03042 | Yes | 11 | 6 | |
| HRGMv2_0320_CGC14 | CGCFAM_03101 | Yes | 5 | 2 | |
| HRGMv2_0320_CGC3 | CGCFAM_03895 | Yes | 7 | 1 | |
| HRGMv2_0320_CGC26 | CGCFAM_03935 | Yes | 12 | 2 | |
| HRGMv2_0320_CGC10 | CGCFAM_04336 | Yes | 5 | 1 | |
| HRGMv2_0320_CGC4 | CGCFAM_06481 | Yes | 18 | 11 | |
| HRGMv2_0320_CGC28 | CGCFAM_07362 | Yes | 4 | 1 | |
| HRGMv2_0320_CGC15 | CGCFAM_08363 | Yes | 4 | 2 | |
| HRGMv2_0320_CGC2 | CGCFAM_08935 | Yes | 4 | 1 | |
| HRGMv2_0320_CGC54 | CGCFAM_09451 | Yes | 5 | 2 | |
| HRGMv2_0320_CGC31 | CGCFAM_09599 | Yes | 3 | 1 |
Top CAZyme Families