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Cluster: HRGMv2_0320_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_10 8421 9653 + GT4
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_11 9835 10581 + CE14
NULL(UNKNOWN) HRGMv2_0320_6 HRGMv2_0320_6_12 10581 11702 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_13 11699 12823 + GT4
pfam HRGMv2_0320_6 HRGMv2_0320_6_14 12912 14216 + Wzy_C
TC HRGMv2_0320_6 HRGMv2_0320_6_15 14216 15541 + 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_0320_6 HRGMv2_0320_6_16 15545 16468 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_17 16437 17357 + GT2
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_18 17386 18552 + GT4
pfam HRGMv2_0320_6 HRGMv2_0320_6_19 18708 19751 + Acyl_transf_3
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_20 19760 20512 + GT26
Gene ID: HRGMv2_0320_6_10
Type: CAZyme
Location: 8421 - 9653 (+)
Gene ID: HRGMv2_0320_6_11
Type: CAZyme
Location: 9835 - 10581 (+)
Gene ID: HRGMv2_0320_6_12
Type:
Location: 10581 - 11702 (+)
Gene ID: HRGMv2_0320_6_13
Type: CAZyme
Location: 11699 - 12823 (+)
Gene ID: HRGMv2_0320_6_14
Type: pfam
Location: 12912 - 14216 (+)
Gene ID: HRGMv2_0320_6_15
Type: TC
Location: 14216 - 15541 (+)
Gene ID: HRGMv2_0320_6_16
Type:
Location: 15545 - 16468 (+)
Gene ID: HRGMv2_0320_6_17
Type: CAZyme
Location: 16437 - 17357 (+)
Gene ID: HRGMv2_0320_6_18
Type: CAZyme
Location: 17386 - 18552 (+)
Gene ID: HRGMv2_0320_6_19
Type: pfam
Location: 18708 - 19751 (+)
Gene ID: HRGMv2_0320_6_20
Type: CAZyme
Location: 19760 - 20512 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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