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Cluster: HRGMv2_0320_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0320_9 HRGMv2_0320_9_64 84424 86295 + GH32
CAZyme HRGMv2_0320_9 HRGMv2_0320_9_65 86317 88512 + GH36
TC HRGMv2_0320_9 HRGMv2_0320_9_66 88550 89716 + 2.A.1.7.17
STP HRGMv2_0320_9 HRGMv2_0320_9_67 89882 90775 + PfkB
TF HRGMv2_0320_9 HRGMv2_0320_9_68 90994 93756 + HTH_AraC | HTH_AraC
TC HRGMv2_0320_9 HRGMv2_0320_9_69 93878 96388 - 1.B.14.6.14
pfam HRGMv2_0320_9 HRGMv2_0320_9_70 96780 97787 - Semialdhyde_dh | Semialdhyde_dhC
TC HRGMv2_0320_9 HRGMv2_0320_9_71 97923 100058 + 2.A.37.2.5
pfam HRGMv2_0320_9 HRGMv2_0320_9_72 100058 100816 + ThiF
TC HRGMv2_0320_9 HRGMv2_0320_9_73 100920 101597 + 3.A.1.122.2
pfam HRGMv2_0320_9 HRGMv2_0320_9_74 101710 102726 - HHH_3 | HHH_3 | HHH_3
TC HRGMv2_0320_9 HRGMv2_0320_9_75 102734 104095 - 2.A.22.5.3
Gene ID: HRGMv2_0320_9_64
Type: CAZyme
Location: 84424 - 86295 (+)
Gene ID: HRGMv2_0320_9_65
Type: CAZyme
Location: 86317 - 88512 (+)
Gene ID: HRGMv2_0320_9_66
Type: TC
Location: 88550 - 89716 (+)
Gene ID: HRGMv2_0320_9_67
Type: STP
Location: 89882 - 90775 (+)
Gene ID: HRGMv2_0320_9_68
Type: TF
Location: 90994 - 93756 (+)
Gene ID: HRGMv2_0320_9_69
Type: TC
Location: 93878 - 96388 (-)
Gene ID: HRGMv2_0320_9_70
Type: pfam
Location: 96780 - 97787 (-)
Gene ID: HRGMv2_0320_9_71
Type: TC
Location: 97923 - 100058 (+)
Gene ID: HRGMv2_0320_9_72
Type: pfam
Location: 100058 - 100816 (+)
Gene ID: HRGMv2_0320_9_73
Type: TC
Location: 100920 - 101597 (+)
Gene ID: HRGMv2_0320_9_74
Type: pfam
Location: 101710 - 102726 (-)
Gene ID: HRGMv2_0320_9_75
Type: TC
Location: 102734 - 104095 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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