Cluster: HRGMv2_0320_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0320
- CGC Family ID: CGCFAM_03895
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0320_1 | HRGMv2_0320_1_54 | 65673 | 68105 | + | GH2 |
| STP | HRGMv2_0320_1 | HRGMv2_0320_1_55 | 68364 | 69404 | + | AAA |
| NULL(UNKNOWN) | HRGMv2_0320_1 | HRGMv2_0320_1_56 | 69421 | 70863 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0320_1 | HRGMv2_0320_1_57 | 70913 | 72280 | + | 9.B.145.1.2 |
| peptidase | HRGMv2_0320_1 | HRGMv2_0320_1_58 | 72307 | 74439 | + | S46.UPW |
| TF | HRGMv2_0320_1 | HRGMv2_0320_1_59 | 74769 | 75695 | - | HTH_1 |
| TC | HRGMv2_0320_1 | HRGMv2_0320_1_60 | 75720 | 77627 | - | 3.A.18.1.1 |
Gene ID: HRGMv2_0320_1_54
Type: CAZyme
Location: 65673 - 68105 (+)
Type: CAZyme
Location: 65673 - 68105 (+)
Gene ID: HRGMv2_0320_1_55
Type: STP
Location: 68364 - 69404 (+)
Type: STP
Location: 68364 - 69404 (+)
Gene ID: HRGMv2_0320_1_56
Type:
Location: 69421 - 70863 (+)
Type:
Location: 69421 - 70863 (+)
Gene ID: HRGMv2_0320_1_57
Type: TC
Location: 70913 - 72280 (+)
Type: TC
Location: 70913 - 72280 (+)
Gene ID: HRGMv2_0320_1_58
Type: peptidase
Location: 72307 - 74439 (+)
Type: peptidase
Location: 72307 - 74439 (+)
Gene ID: HRGMv2_0320_1_59
Type: TF
Location: 74769 - 75695 (-)
Type: TF
Location: 74769 - 75695 (-)
Gene ID: HRGMv2_0320_1_60
Type: TC
Location: 75720 - 77627 (-)
Type: TC
Location: 75720 - 77627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ndongoniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.