PROTEIN: HRGMv2_0320_1_56
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Protein File & Metadata
Source:
HRGMv2_0320_1_56.pdb
Genome ID:
Protein ID:
HRGMv2_0320_1_56
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Protein Sequence
MANLKSLAKE TAIYGLSSIV GRFLNYLLVP VYTLAMSAES GGYGVVTNIY AWVALALVLL 60 TFGMETGFFR FANNGKDDPM RVYSTTLLGV GGVALTFLVL GLLFLQPIAG LLGYAEHPEY 120 VGMMMAVVAM DAFQSIPFAY LRYKKRPIKF AALKLLFIFL NIALNLAYYV WMKGSDVGYA 180 FLFNLICTST VMLCLIPELR GFRYALDRAL LRRMLSYSLP LLVLGLAGIL NQVADKIIFP 240 YVYPDKAEAT VQLGIYGAAS KIAMIMAMLT QAFRYAYEPF VFGKSRDKDN REVYAQAMKF 300 FIIFTLLAFL AVMFYLDLLK FIIGRDYWAG LRVVPIVMAA EIFMGIYFNL SFWYKLIDET 360 RWGAYFSLAG CTVLVLMNVL LIPRFSYMAC AWAGFTGYGV AMLLSYFVGQ KKYPIRYDLK 420 AIGGYVLLAA VLYVAAEYVP IDNIWLRLAY RTVLLLVFVA YVVKKDLPLR HIPVVNRFFR 480
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAD8-F1-model_v4 | 4 | 479 | 1 | 472 | 0.8607 |
0.8844 |
| AF-Q58467-F1-model_v4 | 1 | 477 | 1 | 505 | 0.8557 |
0.8991 |
| AF-H9L497-F1-model_v4 | 1 | 480 | 1 | 487 | 0.8548 |
0.8815 |
| AF-Q8DPI1-F1-model_v4 | 2 | 480 | 1 | 491 | 0.854 |
0.8838 |
| AF-Q2G262-F1-model_v4 | 1 | 478 | 1 | 476 | 0.8538 |
0.8734 |
| AF-A0A0H3GSJ3-F1-model_v4 | 5 | 480 | 1 | 478 | 0.8524 |
0.8753 |
| AF-P77377-F1-model_v4 | 1 | 480 | 1 | 487 | 0.8498 |
0.8769 |
| AF-P37746-F1-model_v4 | 1 | 417 | 2 | 415 | 0.8334 |
0.907 |
| AF-Q2G0R7-F1-model_v4 | 2 | 480 | 1 | 506 | 0.8285 |
0.872 |
| AF-A0A1A7SN45-F1-model_v4 | 1 | 477 | 1 | 464 | 0.8256 |
0.8643 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 475 | 1 | 505 | 0.8216 |
0.8748 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 477 | 36 | 544 | 0.7906 |
0.8604 |
| QNU38870.1 | GT4 | 6 | 480 | 1 | 476 | 0.7756 |
0.8832 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 480 | 1 | 622 | 0.6732 |
0.8658 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 7 | 480 | 1 | 614 | 0.6668 |
0.8625 |
| AF-A0A517ZC93-F1-model_v4 | GT4 | 1 | 480 | 16 | 515 | 0.6608 |
0.8901 |
| A0A0C5BEZ8 | GT4 | 2 | 480 | 1 | 586 | 0.6576 |
0.8629 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 1 | 480 | 1 | 587 | 0.6559 |
0.8558 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 478 | 6 | 668 | 0.6559 |
0.856 |
| AF-A1R6N5-F1-model_v4 | GT2 | 1 | 477 | 6 | 498 | 0.6552 |
0.8476 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 475 | 1 | 505 | 0.8216 |
0.8748 |
| A0A160T2N7 | GT28 | 1 | 477 | 36 | 544 | 0.7906 |
0.8604 |
| QNU38870.1 | GT4 | 6 | 480 | 1 | 476 | 0.7756 |
0.8832 |
| A0A3T0RPT8 | GT4 | 1 | 480 | 1 | 622 | 0.6732 |
0.8658 |
| QJC17489.1 | GT2 | 1 | 479 | 337 | 845 | 0.6718 |
0.8654 |
| A0A2U8PPB3 | GT4 | 7 | 480 | 1 | 614 | 0.6668 |
0.8625 |
| A0A517ZC93 | GT4 | 1 | 480 | 16 | 515 | 0.6608 |
0.8901 |
| A0A0C5BEZ8 | GT4 | 2 | 480 | 1 | 586 | 0.6576 |
0.8629 |
| A0A517Z2I8 | GT2 | 1 | 478 | 6 | 668 | 0.6559 |
0.856 |
| A0A4V3CWU6 | GT4 | 7 | 472 | 1 | 554 | 0.6547 |
0.8618 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nc6-assembly2.cif.gz_B | 9 | 471 | 1 | 461 | 0.8093 |
0.8445 |
| 7waw-assembly1.cif.gz_A | 13 | 472 | 1 | 496 | 0.7929 |
0.8571 |
| 7wag-assembly1.cif.gz_A | 4 | 474 | 1 | 508 | 0.7684 |
0.8336 |
| 6cc4-assembly1.cif.gz_A | 1 | 474 | 40 | 608 | 0.7519 |
0.8621 |
| 6fhz-assembly1.cif.gz_A | 8 | 416 | 8 | 435 | 0.7426 |
0.8459 |
| 3wbn-assembly1.cif.gz_A | 2 | 414 | 3 | 445 | 0.6593 |
0.759 |
| 6gwh-assembly1.cif.gz_A | 2 | 414 | 4 | 434 | 0.6591 |
0.7517 |
| 5y50-assembly1.cif.gz_A | 1 | 413 | 1 | 435 | 0.658 |
0.7549 |
| 4mlb-assembly1.cif.gz_C | 2 | 414 | 5 | 447 | 0.6579 |
0.7589 |
| 6hfb-assembly3.cif.gz_C | 2 | 414 | 5 | 446 | 0.6562 |
0.7563 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 1 | 477 | 1 | 505 | 0.8557 |
0.8991 |
| AF-P77377-F1-model_v4 | 1 | 480 | 1 | 487 | 0.8498 |
0.8769 |
| AF-O32273-F1-model_v4 | 1 | 479 | 1 | 482 | 0.8472 |
0.87 |
| AF-Q48457-F1-model_v4 | 1 | 477 | 1 | 483 | 0.846 |
0.8734 |
| AF-P33699-F1-model_v4 | 1 | 477 | 4 | 484 | 0.8438 |
0.8778 |
| AF-D4GU68-F1-model_v4 | 3 | 478 | 1 | 472 | 0.838 |
0.8643 |
| AF-P37746-F1-model_v4 | 1 | 417 | 2 | 415 | 0.8334 |
0.907 |
| AF-P71060-F1-model_v4 | 5 | 480 | 1 | 501 | 0.8303 |
0.8753 |
| AF-D4GYG8-F1-model_v4 | 4 | 478 | 1 | 476 | 0.8254 |
0.8505 |
| AF-O34238-F1-model_v4 | 1 | 473 | 4 | 522 | 0.8207 |
0.884 |