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Cluster: HRGMv2_0320_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0320_2 HRGMv2_0320_2_51 53168 54721 + 3.B.1.1.2
pfam HRGMv2_0320_2 HRGMv2_0320_2_52 54737 55687 + LTD | OAD_gamma
pfam HRGMv2_0320_2 HRGMv2_0320_2_53 55718 56149 + Biotin_lipoyl | Biotin_lipoyl_2
TC HRGMv2_0320_2 HRGMv2_0320_2_54 56154 57320 + 3.B.1.1.2
STP HRGMv2_0320_2 HRGMv2_0320_2_55 57739 59067 + TPR_1
CAZyme HRGMv2_0320_2 HRGMv2_0320_2_56 59191 61044 + GH13_46
TC HRGMv2_0320_2 HRGMv2_0320_2_57 61213 62115 - 2.A.4.1.3
Gene ID: HRGMv2_0320_2_51
Type: TC
Location: 53168 - 54721 (+)
Gene ID: HRGMv2_0320_2_52
Type: pfam
Location: 54737 - 55687 (+)
Gene ID: HRGMv2_0320_2_53
Type: pfam
Location: 55718 - 56149 (+)
Gene ID: HRGMv2_0320_2_54
Type: TC
Location: 56154 - 57320 (+)
Gene ID: HRGMv2_0320_2_55
Type: STP
Location: 57739 - 59067 (+)
Gene ID: HRGMv2_0320_2_56
Type: CAZyme
Location: 59191 - 61044 (+)
Gene ID: HRGMv2_0320_2_57
Type: TC
Location: 61213 - 62115 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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