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Cluster: HRGMv2_0320_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0320_22 HRGMv2_0320_22_6 5415 7544 - GH97
CAZyme HRGMv2_0320_22 HRGMv2_0320_22_7 7579 8994 - GH27
CAZyme HRGMv2_0320_22 HRGMv2_0320_22_8 9001 10329 - GH27
pfam HRGMv2_0320_22 HRGMv2_0320_22_9 10354 10812 - SusF_SusE
TC HRGMv2_0320_22 HRGMv2_0320_22_10 10841 12580 - 8.A.46.1.1
TC HRGMv2_0320_22 HRGMv2_0320_22_11 12603 15587 - 1.B.14.6.1
pfam HRGMv2_0320_22 HRGMv2_0320_22_12 15747 17417 - DUF6377
TC HRGMv2_0320_22 HRGMv2_0320_22_13 17524 19725 - 3.A.10.1.10
NULL(UNKNOWN) HRGMv2_0320_22 HRGMv2_0320_22_14 19912 20259 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0320_22 HRGMv2_0320_22_15 20418 21401 + 9.A.40.2.4
Gene ID: HRGMv2_0320_22_6
Type: CAZyme
Location: 5415 - 7544 (-)
Gene ID: HRGMv2_0320_22_7
Type: CAZyme
Location: 7579 - 8994 (-)
Gene ID: HRGMv2_0320_22_8
Type: CAZyme
Location: 9001 - 10329 (-)
Gene ID: HRGMv2_0320_22_9
Type: pfam
Location: 10354 - 10812 (-)
Gene ID: HRGMv2_0320_22_10
Type: TC
Location: 10841 - 12580 (-)
Gene ID: HRGMv2_0320_22_11
Type: TC
Location: 12603 - 15587 (-)
Gene ID: HRGMv2_0320_22_12
Type: pfam
Location: 15747 - 17417 (-)
Gene ID: HRGMv2_0320_22_13
Type: TC
Location: 17524 - 19725 (-)
Gene ID: HRGMv2_0320_22_14
Type:
Location: 19912 - 20259 (+)
Gene ID: HRGMv2_0320_22_15
Type: TC
Location: 20418 - 21401 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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