Cluster: HRGMv2_0320_CGC59
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0320
- CGC Family ID: CGCFAM_00077
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0320_48 | HRGMv2_0320_48_8 | 11043 | 11759 | + | 3.A.1.122.2 |
| TC | HRGMv2_0320_48 | HRGMv2_0320_48_9 | 11788 | 13047 | + | 3.A.1.122.2 |
| TC | HRGMv2_0320_48 | HRGMv2_0320_48_10 | 13216 | 14457 | + | 3.A.1.122.12 |
| pfam | HRGMv2_0320_48 | HRGMv2_0320_48_11 | 14598 | 15713 | + | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| pfam | HRGMv2_0320_48 | HRGMv2_0320_48_12 | 15744 | 17072 | + | OEP | OEP |
| CAZyme | HRGMv2_0320_48 | HRGMv2_0320_48_13 | 17134 | 19116 | + | GT51 |
Gene ID: HRGMv2_0320_48_8
Type: TC
Location: 11043 - 11759 (+)
Type: TC
Location: 11043 - 11759 (+)
Gene ID: HRGMv2_0320_48_9
Type: TC
Location: 11788 - 13047 (+)
Type: TC
Location: 11788 - 13047 (+)
Gene ID: HRGMv2_0320_48_10
Type: TC
Location: 13216 - 14457 (+)
Type: TC
Location: 13216 - 14457 (+)
Gene ID: HRGMv2_0320_48_11
Type: pfam
Location: 14598 - 15713 (+)
Type: pfam
Location: 14598 - 15713 (+)
Gene ID: HRGMv2_0320_48_12
Type: pfam
Location: 15744 - 17072 (+)
Type: pfam
Location: 15744 - 17072 (+)
Gene ID: HRGMv2_0320_48_13
Type: CAZyme
Location: 17134 - 19116 (+)
Type: CAZyme
Location: 17134 - 19116 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ndongoniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.