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Cluster: HRGMv2_0320_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_51 65302 66462 + CE19
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_52 66497 67807 - CE7
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_53 67816 69585 - CE12 | CE8
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_54 69789 70772 - CE8
CAZyme HRGMv2_0320_6 HRGMv2_0320_6_55 70785 72002 - GH105
TC HRGMv2_0320_6 HRGMv2_0320_6_56 72293 73714 + 4.A.5.1.2
pfam HRGMv2_0320_6 HRGMv2_0320_6_57 73750 74706 + KduI
NULL(UNKNOWN) HRGMv2_0320_6 HRGMv2_0320_6_58 74750 74842 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0320_6 HRGMv2_0320_6_59 74853 76400 + 2.A.1.14.25
pfam HRGMv2_0320_6 HRGMv2_0320_6_60 76645 80061 - AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC HRGMv2_0320_6 HRGMv2_0320_6_61 80309 81097 - 2.A.64.2.1
Gene ID: HRGMv2_0320_6_51
Type: CAZyme
Location: 65302 - 66462 (+)
Gene ID: HRGMv2_0320_6_52
Type: CAZyme
Location: 66497 - 67807 (-)
Gene ID: HRGMv2_0320_6_53
Type: CAZyme
Location: 67816 - 69585 (-)
Gene ID: HRGMv2_0320_6_54
Type: CAZyme
Location: 69789 - 70772 (-)
Gene ID: HRGMv2_0320_6_55
Type: CAZyme
Location: 70785 - 72002 (-)
Gene ID: HRGMv2_0320_6_56
Type: TC
Location: 72293 - 73714 (+)
Gene ID: HRGMv2_0320_6_57
Type: pfam
Location: 73750 - 74706 (+)
Gene ID: HRGMv2_0320_6_58
Type:
Location: 74750 - 74842 (+)
Gene ID: HRGMv2_0320_6_59
Type: TC
Location: 74853 - 76400 (+)
Gene ID: HRGMv2_0320_6_60
Type: pfam
Location: 76645 - 80061 (-)
Gene ID: HRGMv2_0320_6_61
Type: TC
Location: 80309 - 81097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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