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Genome Details

Selected Rep_genome_ID: HRGMv2_0308
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0308 3,669,073 97.61% 0.503% UK Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0308_CGC48 CGCFAM_00001 Yes 7 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0308_CGC52 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0308_CGC11 CGCFAM_00023 Yes 4 1
HRGMv2_0308_CGC1 CGCFAM_00023 Yes 6 1
HRGMv2_0308_CGC57 CGCFAM_00033 Yes 9 7
HRGMv2_0308_CGC17 CGCFAM_00044 Yes 9 5 beta-mannan/xylan/beta-glucan
HRGMv2_0308_CGC13 CGCFAM_00068 Yes 8 4
HRGMv2_0308_CGC15 CGCFAM_00091 Yes 3 1
HRGMv2_0308_CGC47 CGCFAM_00091 Yes 12 5
HRGMv2_0308_CGC35 CGCFAM_00109 Yes 6 2 host glycan
HRGMv2_0308_CGC22 CGCFAM_00118 Yes 7 3
HRGMv2_0308_CGC38 CGCFAM_00145 Yes 6 1
HRGMv2_0308_CGC12 CGCFAM_00165 Yes 8 1
HRGMv2_0308_CGC19 CGCFAM_00175 Yes 10 4 alpha-glucan
HRGMv2_0308_CGC25 CGCFAM_00217 Yes 15 8
HRGMv2_0308_CGC32 CGCFAM_00240 Yes 8 2 fructan
HRGMv2_0308_CGC36 CGCFAM_00296 Yes 7 3
HRGMv2_0308_CGC16 CGCFAM_00372 Yes 8 3
HRGMv2_0308_CGC27 CGCFAM_00395 Yes 20 2
HRGMv2_0308_CGC40 CGCFAM_00478 Yes 5 1
HRGMv2_0308_CGC24 CGCFAM_00574 Yes 7 1
HRGMv2_0308_CGC6 CGCFAM_00623 Yes 4 1
HRGMv2_0308_CGC37 CGCFAM_00714 Yes 6 1
HRGMv2_0308_CGC61 CGCFAM_00820 Yes 4 1 beta-glucan
HRGMv2_0308_CGC4 CGCFAM_00830 Yes 3 1 pectin
Top CAZyme Families