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Cluster: HRGMv2_0308_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0308_29 HRGMv2_0308_29_14 12862 13956 - CE2
TC HRGMv2_0308_29 HRGMv2_0308_29_15 14049 15881 - 2.A.47.4.8
pfam HRGMv2_0308_29 HRGMv2_0308_29_16 16373 16879 - PepSY_like | PepSY_like
STP HRGMv2_0308_29 HRGMv2_0308_29_17 17002 17880 - PfkB
TC HRGMv2_0308_29 HRGMv2_0308_29_18 17905 19089 - 2.A.1.7.17
CAZyme HRGMv2_0308_29 HRGMv2_0308_29_19 19111 21006 - GH32
TF HRGMv2_0308_29 HRGMv2_0308_29_20 21152 23899 + HTH_AraC
TC HRGMv2_0308_29 HRGMv2_0308_29_21 24022 27114 + 1.B.14.6.1
Gene ID: HRGMv2_0308_29_14
Type: CAZyme
Location: 12862 - 13956 (-)
Gene ID: HRGMv2_0308_29_15
Type: TC
Location: 14049 - 15881 (-)
Gene ID: HRGMv2_0308_29_16
Type: pfam
Location: 16373 - 16879 (-)
Gene ID: HRGMv2_0308_29_17
Type: STP
Location: 17002 - 17880 (-)
Gene ID: HRGMv2_0308_29_18
Type: TC
Location: 17905 - 19089 (-)
Gene ID: HRGMv2_0308_29_19
Type: CAZyme
Location: 19111 - 21006 (-)
Gene ID: HRGMv2_0308_29_20
Type: TF
Location: 21152 - 23899 (+)
Gene ID: HRGMv2_0308_29_21
Type: TC
Location: 24022 - 27114 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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