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Cluster: HRGMv2_0308_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_8 HRGMv2_0308_8_21 19513 22821 + 1.B.14.6.1
pfam HRGMv2_0308_8 HRGMv2_0308_8_22 22841 24568 + SusD_RagB | SusD-like_3
pfam HRGMv2_0308_8 HRGMv2_0308_8_23 24645 26159 + SusF_SusE | SusF_SusE
CAZyme HRGMv2_0308_8 HRGMv2_0308_8_24 26275 27684 + GH27
pfam HRGMv2_0308_8 HRGMv2_0308_8_25 27697 28623 + SusF_SusE
CAZyme HRGMv2_0308_8 HRGMv2_0308_8_26 28630 30609 + CE20 | CE20
CAZyme HRGMv2_0308_8 HRGMv2_0308_8_27 30632 32683 + GH97
CAZyme HRGMv2_0308_8 HRGMv2_0308_8_28 32981 34828 + GH127
Gene ID: HRGMv2_0308_8_21
Type: TC
Location: 19513 - 22821 (+)
Gene ID: HRGMv2_0308_8_22
Type: pfam
Location: 22841 - 24568 (+)
Gene ID: HRGMv2_0308_8_23
Type: pfam
Location: 24645 - 26159 (+)
Gene ID: HRGMv2_0308_8_24
Type: CAZyme
Location: 26275 - 27684 (+)
Gene ID: HRGMv2_0308_8_25
Type: pfam
Location: 27697 - 28623 (+)
Gene ID: HRGMv2_0308_8_26
Type: CAZyme
Location: 28630 - 30609 (+)
Gene ID: HRGMv2_0308_8_27
Type: CAZyme
Location: 30632 - 32683 (+)
Gene ID: HRGMv2_0308_8_28
Type: CAZyme
Location: 32981 - 34828 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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