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Cluster: HRGMv2_0308_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0308_15 HRGMv2_0308_15_6 8063 10366 + GH3
NULL(UNKNOWN) HRGMv2_0308_15 HRGMv2_0308_15_7 10375 11712 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_0308_15 HRGMv2_0308_15_8 11812 13050 + S1_48
CAZyme HRGMv2_0308_15 HRGMv2_0308_15_9 13110 15230 - GH97
CAZyme HRGMv2_0308_15 HRGMv2_0308_15_10 15242 16594 - GH13
pfam HRGMv2_0308_15 HRGMv2_0308_15_11 16591 18027 - CBM26
pfam HRGMv2_0308_15 HRGMv2_0308_15_12 18045 19844 - SusD_RagB
TC HRGMv2_0308_15 HRGMv2_0308_15_13 19865 22831 - 1.B.14.6.1
pfam HRGMv2_0308_15 HRGMv2_0308_15_14 23045 24712 - DUF6377
CAZyme HRGMv2_0308_15 HRGMv2_0308_15_15 24989 26665 + GH13
Gene ID: HRGMv2_0308_15_6
Type: CAZyme
Location: 8063 - 10366 (+)
Gene ID: HRGMv2_0308_15_7
Type:
Location: 10375 - 11712 (+)
Gene ID: HRGMv2_0308_15_8
Type: sulfatase
Location: 11812 - 13050 (+)
Gene ID: HRGMv2_0308_15_9
Type: CAZyme
Location: 13110 - 15230 (-)
Gene ID: HRGMv2_0308_15_10
Type: CAZyme
Location: 15242 - 16594 (-)
Gene ID: HRGMv2_0308_15_11
Type: pfam
Location: 16591 - 18027 (-)
Gene ID: HRGMv2_0308_15_12
Type: pfam
Location: 18045 - 19844 (-)
Gene ID: HRGMv2_0308_15_13
Type: TC
Location: 19865 - 22831 (-)
Gene ID: HRGMv2_0308_15_14
Type: pfam
Location: 23045 - 24712 (-)
Gene ID: HRGMv2_0308_15_15
Type: CAZyme
Location: 24989 - 26665 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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