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Cluster: HRGMv2_0308_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0308_13 HRGMv2_0308_13_28 31492 33246 - GH67
CAZyme HRGMv2_0308_13 HRGMv2_0308_13_29 33246 34217 - GH43_1
CAZyme HRGMv2_0308_13 HRGMv2_0308_13_30 34235 35365 - GH10
TC HRGMv2_0308_13 HRGMv2_0308_13_31 35416 36852 - 2.A.2.3.2
CAZyme HRGMv2_0308_13 HRGMv2_0308_13_32 36880 38586 - GH35
CAZyme HRGMv2_0308_13 HRGMv2_0308_13_33 38682 40997 - GH10
pfam HRGMv2_0308_13 HRGMv2_0308_13_34 41034 42446 - SGBP_B_XBD
pfam HRGMv2_0308_13 HRGMv2_0308_13_35 42464 44155 - SusD_RagB | SusD-like_3
TC HRGMv2_0308_13 HRGMv2_0308_13_36 44171 44866 - 1.B.14.6.1
Gene ID: HRGMv2_0308_13_28
Type: CAZyme
Location: 31492 - 33246 (-)
Gene ID: HRGMv2_0308_13_29
Type: CAZyme
Location: 33246 - 34217 (-)
Gene ID: HRGMv2_0308_13_30
Type: CAZyme
Location: 34235 - 35365 (-)
Gene ID: HRGMv2_0308_13_31
Type: TC
Location: 35416 - 36852 (-)
Gene ID: HRGMv2_0308_13_32
Type: CAZyme
Location: 36880 - 38586 (-)
Gene ID: HRGMv2_0308_13_33
Type: CAZyme
Location: 38682 - 40997 (-)
Gene ID: HRGMv2_0308_13_34
Type: pfam
Location: 41034 - 42446 (-)
Gene ID: HRGMv2_0308_13_35
Type: pfam
Location: 42464 - 44155 (-)
Gene ID: HRGMv2_0308_13_36
Type: TC
Location: 44171 - 44866 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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