Cluster: HRGMv2_0308_CGC47
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0308
- CGC Family ID: CGCFAM_00091
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0308_77 | HRGMv2_0308_77_2 | 1107 | 2645 | + | 2.A.66.1.40 |
| pfam | HRGMv2_0308_77 | HRGMv2_0308_77_3 | 2647 | 3507 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_0308_77 | HRGMv2_0308_77_4 | 3509 | 4780 | + | GT4 |
| pfam | HRGMv2_0308_77 | HRGMv2_0308_77_5 | 4761 | 5876 | + | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4 |
| pfam | HRGMv2_0308_77 | HRGMv2_0308_77_6 | 5873 | 6469 | + | Hexapep |
| CAZyme | HRGMv2_0308_77 | HRGMv2_0308_77_7 | 6466 | 7446 | + | GT2 |
| CAZyme | HRGMv2_0308_77 | HRGMv2_0308_77_8 | 7459 | 8586 | + | GT4 |
| pfam | HRGMv2_0308_77 | HRGMv2_0308_77_9 | 8716 | 9924 | + | Wzy_C |
| TC | HRGMv2_0308_77 | HRGMv2_0308_77_10 | 9930 | 11255 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_0308_77 | HRGMv2_0308_77_11 | 11259 | 12179 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0308_77 | HRGMv2_0308_77_12 | 12145 | 13071 | + | GT2 |
| CAZyme | HRGMv2_0308_77 | HRGMv2_0308_77_13 | 13565 | 14716 | + | GT4 |
Gene ID: HRGMv2_0308_77_2
Type: TC
Location: 1107 - 2645 (+)
Type: TC
Location: 1107 - 2645 (+)
Gene ID: HRGMv2_0308_77_3
Type: pfam
Location: 2647 - 3507 (+)
Type: pfam
Location: 2647 - 3507 (+)
Gene ID: HRGMv2_0308_77_4
Type: CAZyme
Location: 3509 - 4780 (+)
Type: CAZyme
Location: 3509 - 4780 (+)
Gene ID: HRGMv2_0308_77_5
Type: pfam
Location: 4761 - 5876 (+)
Type: pfam
Location: 4761 - 5876 (+)
Gene ID: HRGMv2_0308_77_6
Type: pfam
Location: 5873 - 6469 (+)
Type: pfam
Location: 5873 - 6469 (+)
Gene ID: HRGMv2_0308_77_7
Type: CAZyme
Location: 6466 - 7446 (+)
Type: CAZyme
Location: 6466 - 7446 (+)
Gene ID: HRGMv2_0308_77_8
Type: CAZyme
Location: 7459 - 8586 (+)
Type: CAZyme
Location: 7459 - 8586 (+)
Gene ID: HRGMv2_0308_77_9
Type: pfam
Location: 8716 - 9924 (+)
Type: pfam
Location: 8716 - 9924 (+)
Gene ID: HRGMv2_0308_77_10
Type: TC
Location: 9930 - 11255 (+)
Type: TC
Location: 9930 - 11255 (+)
Gene ID: HRGMv2_0308_77_11
Type:
Location: 11259 - 12179 (+)
Type:
Location: 11259 - 12179 (+)
Gene ID: HRGMv2_0308_77_12
Type: CAZyme
Location: 12145 - 13071 (+)
Type: CAZyme
Location: 12145 - 13071 (+)
Gene ID: HRGMv2_0308_77_13
Type: CAZyme
Location: 13565 - 14716 (+)
Type: CAZyme
Location: 13565 - 14716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.