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Cluster: HRGMv2_0308_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_111 HRGMv2_0308_111_3 1869 3356 + 2.A.66.2.23
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_4 3400 4356 + GT2
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_5 4353 5102 + GT32
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_6 5110 6096 + GT8
pfam HRGMv2_0308_111 HRGMv2_0308_111_7 6159 7073 + Acyl_transf_3
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_8 7125 8063 + GT8
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_9 8073 8804 + GT32
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_10 8825 9895 + GT4
CAZyme HRGMv2_0308_111 HRGMv2_0308_111_11 9892 10920 + GT2
Gene ID: HRGMv2_0308_111_3
Type: TC
Location: 1869 - 3356 (+)
Gene ID: HRGMv2_0308_111_4
Type: CAZyme
Location: 3400 - 4356 (+)
Gene ID: HRGMv2_0308_111_5
Type: CAZyme
Location: 4353 - 5102 (+)
Gene ID: HRGMv2_0308_111_6
Type: CAZyme
Location: 5110 - 6096 (+)
Gene ID: HRGMv2_0308_111_7
Type: pfam
Location: 6159 - 7073 (+)
Gene ID: HRGMv2_0308_111_8
Type: CAZyme
Location: 7125 - 8063 (+)
Gene ID: HRGMv2_0308_111_9
Type: CAZyme
Location: 8073 - 8804 (+)
Gene ID: HRGMv2_0308_111_10
Type: CAZyme
Location: 8825 - 9895 (+)
Gene ID: HRGMv2_0308_111_11
Type: CAZyme
Location: 9892 - 10920 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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