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Cluster: HRGMv2_0308_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0308_11 HRGMv2_0308_11_1 3 1628 + PL15_2
TC HRGMv2_0308_11 HRGMv2_0308_11_2 1634 2356 + 9.B.171.1.2
pfam HRGMv2_0308_11 HRGMv2_0308_11_3 2365 3378 + DUF6562
NULL(UNKNOWN) HRGMv2_0308_11 HRGMv2_0308_11_4 3407 4942 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0308_11 HRGMv2_0308_11_5 5080 7548 + PL15
TC HRGMv2_0308_11 HRGMv2_0308_11_6 7569 10778 + 1.B.14.6.1
TC HRGMv2_0308_11 HRGMv2_0308_11_7 10791 12485 + 8.A.46.1.3
CAZyme HRGMv2_0308_11 HRGMv2_0308_11_8 12534 13796 + GH88
Gene ID: HRGMv2_0308_11_1
Type: CAZyme
Location: 3 - 1628 (+)
Gene ID: HRGMv2_0308_11_2
Type: TC
Location: 1634 - 2356 (+)
Gene ID: HRGMv2_0308_11_3
Type: pfam
Location: 2365 - 3378 (+)
Gene ID: HRGMv2_0308_11_4
Type:
Location: 3407 - 4942 (+)
Gene ID: HRGMv2_0308_11_5
Type: CAZyme
Location: 5080 - 7548 (+)
Gene ID: HRGMv2_0308_11_6
Type: TC
Location: 7569 - 10778 (+)
Gene ID: HRGMv2_0308_11_7
Type: TC
Location: 10791 - 12485 (+)
Gene ID: HRGMv2_0308_11_8
Type: CAZyme
Location: 12534 - 13796 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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