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Cluster: HRGMv2_0308_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_21 HRGMv2_0308_21_9 11889 12260 + 3.D.1.8.1
TC HRGMv2_0308_21 HRGMv2_0308_21_10 12251 12865 + 3.D.1.6.1
TC HRGMv2_0308_21 HRGMv2_0308_21_11 12872 14503 + 3.D.1.5.1
TC HRGMv2_0308_21 HRGMv2_0308_21_12 14543 15622 + 3.D.1.5.1
TC HRGMv2_0308_21 HRGMv2_0308_21_13 15651 17153 + 3.A.2.1.2
pfam HRGMv2_0308_21 HRGMv2_0308_21_14 17161 17397 + ATP-synt_DE_N
TC HRGMv2_0308_21 HRGMv2_0308_21_15 17434 18810 + 3.A.2.1.6
TC HRGMv2_0308_21 HRGMv2_0308_21_16 18848 19117 + 3.A.2.1.6
pfam HRGMv2_0308_21 HRGMv2_0308_21_17 19198 19692 + ATP-synt_B | Mt_ATP-synt_B
pfam HRGMv2_0308_21 HRGMv2_0308_21_18 19697 20245 + OSCP
TC HRGMv2_0308_21 HRGMv2_0308_21_19 20247 21830 + 3.A.2.1.3
TC HRGMv2_0308_21 HRGMv2_0308_21_20 21850 22725 + 3.A.2.1.1
STP HRGMv2_0308_21 HRGMv2_0308_21_21 22770 23318 + Fer4 | Fer4
pfam HRGMv2_0308_21 HRGMv2_0308_21_22 23359 23886 + Oxidored_q3
TC HRGMv2_0308_21 HRGMv2_0308_21_23 23892 24203 + 3.D.1.2.1
TC HRGMv2_0308_21 HRGMv2_0308_21_24 24206 26191 + 3.D.1.2.1
TC HRGMv2_0308_21 HRGMv2_0308_21_25 26218 27735 + 3.D.1.2.1
TC HRGMv2_0308_21 HRGMv2_0308_21_26 27763 29226 + 3.D.9.1.1
CAZyme HRGMv2_0308_21 HRGMv2_0308_21_27 29508 31460 + GH133
CAZyme HRGMv2_0308_21 HRGMv2_0308_21_28 31479 32774 + GT4
Gene ID: HRGMv2_0308_21_9
Type: TC
Location: 11889 - 12260 (+)
Gene ID: HRGMv2_0308_21_10
Type: TC
Location: 12251 - 12865 (+)
Gene ID: HRGMv2_0308_21_11
Type: TC
Location: 12872 - 14503 (+)
Gene ID: HRGMv2_0308_21_12
Type: TC
Location: 14543 - 15622 (+)
Gene ID: HRGMv2_0308_21_13
Type: TC
Location: 15651 - 17153 (+)
Gene ID: HRGMv2_0308_21_14
Type: pfam
Location: 17161 - 17397 (+)
Gene ID: HRGMv2_0308_21_15
Type: TC
Location: 17434 - 18810 (+)
Gene ID: HRGMv2_0308_21_16
Type: TC
Location: 18848 - 19117 (+)
Gene ID: HRGMv2_0308_21_17
Type: pfam
Location: 19198 - 19692 (+)
Gene ID: HRGMv2_0308_21_18
Type: pfam
Location: 19697 - 20245 (+)
Gene ID: HRGMv2_0308_21_19
Type: TC
Location: 20247 - 21830 (+)
Gene ID: HRGMv2_0308_21_20
Type: TC
Location: 21850 - 22725 (+)
Gene ID: HRGMv2_0308_21_21
Type: STP
Location: 22770 - 23318 (+)
Gene ID: HRGMv2_0308_21_22
Type: pfam
Location: 23359 - 23886 (+)
Gene ID: HRGMv2_0308_21_23
Type: TC
Location: 23892 - 24203 (+)
Gene ID: HRGMv2_0308_21_24
Type: TC
Location: 24206 - 26191 (+)
Gene ID: HRGMv2_0308_21_25
Type: TC
Location: 26218 - 27735 (+)
Gene ID: HRGMv2_0308_21_26
Type: TC
Location: 27763 - 29226 (+)
Gene ID: HRGMv2_0308_21_27
Type: CAZyme
Location: 29508 - 31460 (+)
Gene ID: HRGMv2_0308_21_28
Type: CAZyme
Location: 31479 - 32774 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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