Cluster: HRGMv2_0308_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0308
- CGC Family ID: CGCFAM_00118
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0308_17 | HRGMv2_0308_17_12 | 10487 | 13783 | + | 1.B.14.6.1 |
| TC | HRGMv2_0308_17 | HRGMv2_0308_17_13 | 13813 | 15534 | + | 8.A.46.1.1 |
| pfam | HRGMv2_0308_17 | HRGMv2_0308_17_14 | 15553 | 17484 | + | SusF_SusE | SusF_SusE |
| CAZyme | HRGMv2_0308_17 | HRGMv2_0308_17_15 | 17502 | 18914 | + | GH27 |
| pfam | HRGMv2_0308_17 | HRGMv2_0308_17_16 | 18979 | 20256 | + | SusF_SusE |
| CAZyme | HRGMv2_0308_17 | HRGMv2_0308_17_17 | 20339 | 24346 | + | GH127 | GH3 |
| CAZyme | HRGMv2_0308_17 | HRGMv2_0308_17_18 | 24391 | 26688 | + | GH3 |
Gene ID: HRGMv2_0308_17_12
Type: TC
Location: 10487 - 13783 (+)
Type: TC
Location: 10487 - 13783 (+)
Gene ID: HRGMv2_0308_17_13
Type: TC
Location: 13813 - 15534 (+)
Type: TC
Location: 13813 - 15534 (+)
Gene ID: HRGMv2_0308_17_14
Type: pfam
Location: 15553 - 17484 (+)
Type: pfam
Location: 15553 - 17484 (+)
Gene ID: HRGMv2_0308_17_15
Type: CAZyme
Location: 17502 - 18914 (+)
Type: CAZyme
Location: 17502 - 18914 (+)
Gene ID: HRGMv2_0308_17_16
Type: pfam
Location: 18979 - 20256 (+)
Type: pfam
Location: 18979 - 20256 (+)
Gene ID: HRGMv2_0308_17_17
Type: CAZyme
Location: 20339 - 24346 (+)
Type: CAZyme
Location: 20339 - 24346 (+)
Gene ID: HRGMv2_0308_17_18
Type: CAZyme
Location: 24391 - 26688 (+)
Type: CAZyme
Location: 24391 - 26688 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.