Genome Details
Selected Rep_genome_ID: HRGMv2_0258
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides goldsteinii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A137.bin_29 | 6,288,353 | 94.83% | 0.38% | China(Inner Mongolia) | Asia | IMGG |
| AG467_bin.92 | 6,410,152 | 99.23% | 1.37% | NA | Africa | H3AfricaPhase2 |
| CGMR077825 | 6,279,939 | 97.95% | 0% | China | Asia | CGMR |
| CGMR091126 | 6,552,544 | 96.92% | 0.19% | China | Asia | CGMR |
| HRGMv2_0258 | 6,367,659 | 99.61% | 0.128% | UK | Europe | HRGM |
| Rep_557 | 6,411,182 | 98.0769% | 1.05581% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0258_CGC102 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC28 | CGCFAM_00001 | Yes | 11 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC44 | CGCFAM_00001 | Yes | 3 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC47 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC50 | CGCFAM_00001 | Yes | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC59 | CGCFAM_00001 | Yes | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC73 | CGCFAM_00001 | Yes | 3 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC74 | CGCFAM_00001 | Yes | 8 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC86 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0258_CGC14 | CGCFAM_00006 | Yes | 14 | 8 | |
| HRGMv2_0258_CGC31 | CGCFAM_00082 | Yes | 6 | 1 | beta-mannan |
| HRGMv2_0258_CGC41 | CGCFAM_00083 | Yes | 4 | 1 | beta-glucan |
| HRGMv2_0258_CGC42 | CGCFAM_00120 | Yes | 4 | 1 | |
| HRGMv2_0258_CGC76 | CGCFAM_00138 | Yes | 5 | 2 | |
| HRGMv2_0258_CGC6 | CGCFAM_00147 | Yes | 3 | 1 | |
| HRGMv2_0258_CGC8 | CGCFAM_00147 | Yes | 3 | 1 | |
| HRGMv2_0258_CGC1 | CGCFAM_00148 | Yes | 5 | 2 | |
| HRGMv2_0258_CGC79 | CGCFAM_00150 | Yes | 8 | 1 | |
| HRGMv2_0258_CGC82 | CGCFAM_00150 | Yes | 11 | 4 | |
| HRGMv2_0258_CGC67 | CGCFAM_00151 | Yes | 5 | 2 | |
| HRGMv2_0258_CGC98 | CGCFAM_00158 | Yes | 10 | 1 | |
| HRGMv2_0258_CGC97 | CGCFAM_00301 | Yes | 13 | 7 | |
| HRGMv2_0258_CGC11 | CGCFAM_00315 | Yes | 9 | 3 | |
| HRGMv2_0258_CGC24 | CGCFAM_00332 | Yes | 6 | 1 | |
| HRGMv2_0258_CGC30 | CGCFAM_00360 | Yes | 8 | 3 | host glycan |
Top CAZyme Families