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Cluster: HRGMv2_0258_CGC74

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_19 HRGMv2_0258_19_8 11767 12624 - CE1
pfam HRGMv2_0258_19 HRGMv2_0258_19_9 12912 13139 - DUF3874
pfam HRGMv2_0258_19 HRGMv2_0258_19_10 13302 13526 - DUF6078
CAZyme HRGMv2_0258_19 HRGMv2_0258_19_11 13755 16352 - GH2
CAZyme HRGMv2_0258_19 HRGMv2_0258_19_12 16349 17941 - GH20
NULL(UNKNOWN) HRGMv2_0258_19 HRGMv2_0258_19_13 17958 20426 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0258_19 HRGMv2_0258_19_14 20528 22258 - SusD_RagB | SusD-like_3
TC HRGMv2_0258_19 HRGMv2_0258_19_15 22270 25674 - 1.B.14.6.1
Gene ID: HRGMv2_0258_19_8
Type: CAZyme
Location: 11767 - 12624 (-)
Gene ID: HRGMv2_0258_19_9
Type: pfam
Location: 12912 - 13139 (-)
Gene ID: HRGMv2_0258_19_10
Type: pfam
Location: 13302 - 13526 (-)
Gene ID: HRGMv2_0258_19_11
Type: CAZyme
Location: 13755 - 16352 (-)
Gene ID: HRGMv2_0258_19_12
Type: CAZyme
Location: 16349 - 17941 (-)
Gene ID: HRGMv2_0258_19_13
Type:
Location: 17958 - 20426 (-)
Gene ID: HRGMv2_0258_19_14
Type: pfam
Location: 20528 - 22258 (-)
Gene ID: HRGMv2_0258_19_15
Type: TC
Location: 22270 - 25674 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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