dbCAN Logo

Cluster: HRGMv2_0258_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_20 HRGMv2_0258_20_42 66150 67850 - 8.A.46.1.3
TC HRGMv2_0258_20 HRGMv2_0258_20_43 67863 71264 - 1.B.14.6.1
STP HRGMv2_0258_20 HRGMv2_0258_20_44 71432 72364 - FecR
STP HRGMv2_0258_20 HRGMv2_0258_20_45 72506 73099 + Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_0258_20 HRGMv2_0258_20_46 73190 74428 - GH29
NULL(UNKNOWN) HRGMv2_0258_20 HRGMv2_0258_20_47 74461 76926 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0258_20 HRGMv2_0258_20_48 77029 78729 - 8.A.46.1.3
TC HRGMv2_0258_20 HRGMv2_0258_20_49 78742 82137 - 1.B.14.6.1
Gene ID: HRGMv2_0258_20_42
Type: TC
Location: 66150 - 67850 (-)
Gene ID: HRGMv2_0258_20_43
Type: TC
Location: 67863 - 71264 (-)
Gene ID: HRGMv2_0258_20_44
Type: STP
Location: 71432 - 72364 (-)
Gene ID: HRGMv2_0258_20_45
Type: STP
Location: 72506 - 73099 (+)
Gene ID: HRGMv2_0258_20_46
Type: CAZyme
Location: 73190 - 74428 (-)
Gene ID: HRGMv2_0258_20_47
Type:
Location: 74461 - 76926 (-)
Gene ID: HRGMv2_0258_20_48
Type: TC
Location: 77029 - 78729 (-)
Gene ID: HRGMv2_0258_20_49
Type: TC
Location: 78742 - 82137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List