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Genome Details

Selected Rep_genome_ID: HRGMv2_0258
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides goldsteinii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A137.bin_29 6,288,353 94.83% 0.38% China(Inner Mongolia) Asia IMGG
AG467_bin.92 6,410,152 99.23% 1.37% NA Africa H3AfricaPhase2
CGMR077825 6,279,939 97.95% 0% China Asia CGMR
CGMR091126 6,552,544 96.92% 0.19% China Asia CGMR
HRGMv2_0258 6,367,659 99.61% 0.128% UK Europe HRGM
Rep_557 6,411,182 98.0769% 1.05581% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0258_CGC110 CGCFAM_00365 Yes 4 3 host glycan
HRGMv2_0258_CGC93 CGCFAM_00375 Yes 5 2
HRGMv2_0258_CGC104 CGCFAM_00404 Yes 5 1
HRGMv2_0258_CGC58 CGCFAM_00442 Yes 5 3 alpha-glucan
HRGMv2_0258_CGC16 CGCFAM_00535 Yes 4 1 galactan/host glycan
HRGMv2_0258_CGC35 CGCFAM_00535 Yes 6 3 galactan/host glycan
HRGMv2_0258_CGC53 CGCFAM_00535 Yes 5 2 galactan/host glycan
HRGMv2_0258_CGC123 CGCFAM_00649 Yes 8 2 host glycan
HRGMv2_0258_CGC111 CGCFAM_00655 Yes 5 1
HRGMv2_0258_CGC3 CGCFAM_00742 Yes 7 4
HRGMv2_0258_CGC85 CGCFAM_00777 Yes 3 1
HRGMv2_0258_CGC61 CGCFAM_00840 Yes 7 2
HRGMv2_0258_CGC15 CGCFAM_01022 Yes 7 2
HRGMv2_0258_CGC9 CGCFAM_01059 Yes 3 1
HRGMv2_0258_CGC43 CGCFAM_01225 Yes 5 1
HRGMv2_0258_CGC124 CGCFAM_01288 Yes 8 4
HRGMv2_0258_CGC83 CGCFAM_01288 Yes 8 2
HRGMv2_0258_CGC118 CGCFAM_01354 Yes 3 1
HRGMv2_0258_CGC96 CGCFAM_01375 Yes 10 3
HRGMv2_0258_CGC90 CGCFAM_01377 Yes 4 1
HRGMv2_0258_CGC36 CGCFAM_01472 Yes 8 6
HRGMv2_0258_CGC107 CGCFAM_01506 Yes 5 2
HRGMv2_0258_CGC119 CGCFAM_01655 Yes 4 2
HRGMv2_0258_CGC87 CGCFAM_01940 Yes 9 1
HRGMv2_0258_CGC2 CGCFAM_02028 Yes 20 6
Top CAZyme Families