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Cluster: HRGMv2_0258_CGC87

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_23 HRGMv2_0258_23_40 49286 50239 + 9.B.172.1.1
TC HRGMv2_0258_23 HRGMv2_0258_23_41 50267 51670 + 9.A.25.1.1
pfam HRGMv2_0258_23 HRGMv2_0258_23_42 51727 52797 + GldL_N
TC HRGMv2_0258_23 HRGMv2_0258_23_43 52821 54389 + 9.A.25.1.1
pfam HRGMv2_0258_23 HRGMv2_0258_23_44 54434 55528 + GldN
TC HRGMv2_0258_23 HRGMv2_0258_23_45 55882 59106 + 1.B.14.6.1
pfam HRGMv2_0258_23 HRGMv2_0258_23_46 59137 60858 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0258_23 HRGMv2_0258_23_47 60960 61292 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0258_23 HRGMv2_0258_23_48 61523 62008 - GH73
Gene ID: HRGMv2_0258_23_40
Type: TC
Location: 49286 - 50239 (+)
Gene ID: HRGMv2_0258_23_41
Type: TC
Location: 50267 - 51670 (+)
Gene ID: HRGMv2_0258_23_42
Type: pfam
Location: 51727 - 52797 (+)
Gene ID: HRGMv2_0258_23_43
Type: TC
Location: 52821 - 54389 (+)
Gene ID: HRGMv2_0258_23_44
Type: pfam
Location: 54434 - 55528 (+)
Gene ID: HRGMv2_0258_23_45
Type: TC
Location: 55882 - 59106 (+)
Gene ID: HRGMv2_0258_23_46
Type: pfam
Location: 59137 - 60858 (+)
Gene ID: HRGMv2_0258_23_47
Type:
Location: 60960 - 61292 (-)
Gene ID: HRGMv2_0258_23_48
Type: CAZyme
Location: 61523 - 62008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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