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Cluster: HRGMv2_0258_CGC124

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_51 HRGMv2_0258_51_2 1198 4485 + 1.B.14.6.1
sulfatase HRGMv2_0258_51 HRGMv2_0258_51_3 4504 6105 + S1_27
CAZyme HRGMv2_0258_51 HRGMv2_0258_51_4 6180 7616 + GH109
CAZyme HRGMv2_0258_51 HRGMv2_0258_51_5 7696 9294 - GH31_19
CAZyme HRGMv2_0258_51 HRGMv2_0258_51_6 9310 11466 - GH89
CAZyme HRGMv2_0258_51 HRGMv2_0258_51_7 11477 12649 - GH16_24
pfam HRGMv2_0258_51 HRGMv2_0258_51_8 12741 14213 - SusD_RagB | SusD-like_3
TC HRGMv2_0258_51 HRGMv2_0258_51_9 14245 17718 - 1.B.14.6.1
Gene ID: HRGMv2_0258_51_2
Type: TC
Location: 1198 - 4485 (+)
Gene ID: HRGMv2_0258_51_3
Type: sulfatase
Location: 4504 - 6105 (+)
Gene ID: HRGMv2_0258_51_4
Type: CAZyme
Location: 6180 - 7616 (+)
Gene ID: HRGMv2_0258_51_5
Type: CAZyme
Location: 7696 - 9294 (-)
Gene ID: HRGMv2_0258_51_6
Type: CAZyme
Location: 9310 - 11466 (-)
Gene ID: HRGMv2_0258_51_7
Type: CAZyme
Location: 11477 - 12649 (-)
Gene ID: HRGMv2_0258_51_8
Type: pfam
Location: 12741 - 14213 (-)
Gene ID: HRGMv2_0258_51_9
Type: TC
Location: 14245 - 17718 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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