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Genome Details

Selected Rep_genome_ID: HRGMv2_0243
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900313215
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG488_9 3,693,077 98.31% 0.51% NA Africa H3AfricaPhase2
GCF_021615575.1_ASM2161557v1_genomic 2,820,347 94.25% 1.26% NA Africa H3AfricaPhase1
GCF_021620165.1_ASM2162016v1_genomic 3,017,190 96.45% 1.07% NA Africa H3AfricaPhase1
GCF_021621995.1_ASM2162199v1_genomic 3,252,171 97.97% 0.84% NA Africa H3AfricaPhase1
GCF_021622165.1_ASM2162216v1_genomic 2,862,711 93% 2.8% NA Africa H3AfricaPhase1
GCF_021635845.1_ASM2163584v1_genomic 3,507,644 97.98% 1.86% NA Africa H3AfricaPhase1
GH051_bin.4 2,901,611 92.91% 0.51% NA Africa H3AfricaPhase2
HRGMv2_0243 3,317,366 98.31% 0.506% South Korea Asia HRGM
MGYG000001770 3,003,526 97.97% 0.51% Denmark Europe UHGG
Rep_226 3,681,612 98.2733% 0.844595% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0243_CGC15 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0243_CGC33 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0243_CGC1 CGCFAM_00017 Yes 6 2 fructan
HRGMv2_0243_CGC2 CGCFAM_00017 Yes 4 1 fructan
HRGMv2_0243_CGC27 CGCFAM_00048 Yes 10 3
HRGMv2_0243_CGC19 CGCFAM_00049 Yes 5 1
HRGMv2_0243_CGC37 CGCFAM_00059 Yes 4 1
HRGMv2_0243_CGC6 CGCFAM_00068 Yes 11 5
HRGMv2_0243_CGC31 CGCFAM_00080 Yes 3 1
HRGMv2_0243_CGC30 CGCFAM_00158 Yes 8 4
HRGMv2_0243_CGC24 CGCFAM_00186 Yes 7 1
HRGMv2_0243_CGC32 CGCFAM_00331 Yes 9 3 alginate
HRGMv2_0243_CGC4 CGCFAM_00461 Yes 4 1
HRGMv2_0243_CGC21 CGCFAM_00468 Yes 5 2
HRGMv2_0243_CGC17 CGCFAM_00513 Yes 13 5
HRGMv2_0243_CGC20 CGCFAM_00612 Yes 5 1
HRGMv2_0243_CGC16 CGCFAM_00732 Yes 6 2
HRGMv2_0243_CGC26 CGCFAM_01309 Yes 9 5
HRGMv2_0243_CGC25 CGCFAM_01311 Yes 12 4
HRGMv2_0243_CGC7 CGCFAM_01486 Yes 9 2
HRGMv2_0243_CGC5 CGCFAM_02279 Yes 7 5 alpha-mannan
HRGMv2_0243_CGC13 CGCFAM_03891 Yes 4 2
HRGMv2_0243_CGC39 CGCFAM_03982 Yes 3 1
HRGMv2_0243_CGC35 CGCFAM_04695 Yes 7 1
HRGMv2_0243_CGC12 CGCFAM_05948 Yes 4 1
Top CAZyme Families