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Cluster: HRGMv2_0243_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0243_10 HRGMv2_0243_10_71 79535 80503 - GT2
CAZyme HRGMv2_0243_10 HRGMv2_0243_10_72 80505 81494 - GT2
pfam HRGMv2_0243_10 HRGMv2_0243_10_73 81596 83242 - DUF6056
CAZyme HRGMv2_0243_10 HRGMv2_0243_10_74 83239 84168 - GT2
NULL(UNKNOWN) HRGMv2_0243_10 HRGMv2_0243_10_75 84165 85574 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0243_10 HRGMv2_0243_10_76 85574 87616 - Reg_prop | PorZ_N_b_propeller
CAZyme HRGMv2_0243_10 HRGMv2_0243_10_77 87613 88512 - GT2
pfam HRGMv2_0243_10 HRGMv2_0243_10_78 88509 89576 - Acyl_transf_3
sulfatase HRGMv2_0243_10 HRGMv2_0243_10_79 89617 90228 - S1_7
TC HRGMv2_0243_10 HRGMv2_0243_10_80 90310 91263 - 2.A.115.1.2
pfam HRGMv2_0243_10 HRGMv2_0243_10_81 91265 94126 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TC HRGMv2_0243_10 HRGMv2_0243_10_82 94332 95294 - 8.A.5.1.6
Gene ID: HRGMv2_0243_10_71
Type: CAZyme
Location: 79535 - 80503 (-)
Gene ID: HRGMv2_0243_10_72
Type: CAZyme
Location: 80505 - 81494 (-)
Gene ID: HRGMv2_0243_10_73
Type: pfam
Location: 81596 - 83242 (-)
Gene ID: HRGMv2_0243_10_74
Type: CAZyme
Location: 83239 - 84168 (-)
Gene ID: HRGMv2_0243_10_75
Type:
Location: 84165 - 85574 (-)
Gene ID: HRGMv2_0243_10_76
Type: pfam
Location: 85574 - 87616 (-)
Gene ID: HRGMv2_0243_10_77
Type: CAZyme
Location: 87613 - 88512 (-)
Gene ID: HRGMv2_0243_10_78
Type: pfam
Location: 88509 - 89576 (-)
Gene ID: HRGMv2_0243_10_79
Type: sulfatase
Location: 89617 - 90228 (-)
Gene ID: HRGMv2_0243_10_80
Type: TC
Location: 90310 - 91263 (-)
Gene ID: HRGMv2_0243_10_81
Type: pfam
Location: 91265 - 94126 (-)
Gene ID: HRGMv2_0243_10_82
Type: TC
Location: 94332 - 95294 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0243_10_71 vegetarian > vegan 1.75583 0.00279
HRGMv2_0243_10_72 vegetarian > vegan 1.40695 0.00279
HRGMv2_0243_10_79 vegetarian > vegan 1.65807 0.00279

🧭 Explore Read Mapping of CGC

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