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Cluster: HRGMv2_0243_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0243_3 HRGMv2_0243_3_37 38469 41561 + 1.B.14.6.1
pfam HRGMv2_0243_3 HRGMv2_0243_3_38 41591 43468 + SusD_RagB | SusD-like_3
pfam HRGMv2_0243_3 HRGMv2_0243_3_39 43502 44929 + SusE | SusF_SusE
CAZyme HRGMv2_0243_3 HRGMv2_0243_3_40 44948 46501 + GH27
pfam HRGMv2_0243_3 HRGMv2_0243_3_41 46537 47715 + Mfa2
CAZyme HRGMv2_0243_3 HRGMv2_0243_3_42 47754 49898 + GH97
CAZyme HRGMv2_0243_3 HRGMv2_0243_3_43 49974 52283 + GH66
CAZyme HRGMv2_0243_3 HRGMv2_0243_3_44 52552 55143 + GH31_15
pfam HRGMv2_0243_3 HRGMv2_0243_3_45 55156 56550 + SusF_SusE
pfam HRGMv2_0243_3 HRGMv2_0243_3_46 56622 58166 + SusF_SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_0243_3 HRGMv2_0243_3_47 58424 62461 + GH87
Gene ID: HRGMv2_0243_3_37
Type: TC
Location: 38469 - 41561 (+)
Gene ID: HRGMv2_0243_3_38
Type: pfam
Location: 41591 - 43468 (+)
Gene ID: HRGMv2_0243_3_39
Type: pfam
Location: 43502 - 44929 (+)
Gene ID: HRGMv2_0243_3_40
Type: CAZyme
Location: 44948 - 46501 (+)
Gene ID: HRGMv2_0243_3_41
Type: pfam
Location: 46537 - 47715 (+)
Gene ID: HRGMv2_0243_3_42
Type: CAZyme
Location: 47754 - 49898 (+)
Gene ID: HRGMv2_0243_3_43
Type: CAZyme
Location: 49974 - 52283 (+)
Gene ID: HRGMv2_0243_3_44
Type: CAZyme
Location: 52552 - 55143 (+)
Gene ID: HRGMv2_0243_3_45
Type: pfam
Location: 55156 - 56550 (+)
Gene ID: HRGMv2_0243_3_46
Type: pfam
Location: 56622 - 58166 (+)
Gene ID: HRGMv2_0243_3_47
Type: CAZyme
Location: 58424 - 62461 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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