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Cluster: HRGMv2_0243_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0243_11 HRGMv2_0243_11_57 62741 64630 + 3.A.1.106.2
pfam HRGMv2_0243_11 HRGMv2_0243_11_58 64687 65619 + Lip_A_acyltrans
CAZyme HRGMv2_0243_11 HRGMv2_0243_11_59 65654 66472 + GT11
CAZyme HRGMv2_0243_11 HRGMv2_0243_11_60 66502 67422 + GT32
CAZyme HRGMv2_0243_11 HRGMv2_0243_11_61 67434 68234 + GT2
NULL(UNKNOWN) HRGMv2_0243_11 HRGMv2_0243_11_62 68226 68336 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0243_11 HRGMv2_0243_11_63 68933 69442 - GT2
NULL(UNKNOWN) HRGMv2_0243_11 HRGMv2_0243_11_64 69511 70476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0243_11 HRGMv2_0243_11_65 70581 71348 - GT2
Gene ID: HRGMv2_0243_11_57
Type: TC
Location: 62741 - 64630 (+)
Gene ID: HRGMv2_0243_11_58
Type: pfam
Location: 64687 - 65619 (+)
Gene ID: HRGMv2_0243_11_59
Type: CAZyme
Location: 65654 - 66472 (+)
Gene ID: HRGMv2_0243_11_60
Type: CAZyme
Location: 66502 - 67422 (+)
Gene ID: HRGMv2_0243_11_61
Type: CAZyme
Location: 67434 - 68234 (+)
Gene ID: HRGMv2_0243_11_62
Type:
Location: 68226 - 68336 (-)
Gene ID: HRGMv2_0243_11_63
Type: CAZyme
Location: 68933 - 69442 (-)
Gene ID: HRGMv2_0243_11_64
Type:
Location: 69511 - 70476 (-)
Gene ID: HRGMv2_0243_11_65
Type: CAZyme
Location: 70581 - 71348 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0243_11_58 vegetarian > vegan 1.69533 0.00279

🧭 Explore Read Mapping of CGC

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