dbCAN Logo

Cluster: HRGMv2_0243_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0243_27 HRGMv2_0243_27_15 11950 13143 - PL38
pfam HRGMv2_0243_27 HRGMv2_0243_27_16 13161 13916 - adh_short | KR | adh_short_C2 | SDR
TC HRGMv2_0243_27 HRGMv2_0243_27_17 13972 15435 - 2.A.1.14.25
pfam HRGMv2_0243_27 HRGMv2_0243_27_18 15443 15784 - Cupin_2
CAZyme HRGMv2_0243_27 HRGMv2_0243_27_19 15799 17997 - PL17 | PL17_2
CAZyme HRGMv2_0243_27 HRGMv2_0243_27_20 17999 20119 - PL6 | PL6_1
pfam HRGMv2_0243_27 HRGMv2_0243_27_21 20186 21853 - TIG | TIG
TC HRGMv2_0243_27 HRGMv2_0243_27_22 21879 23387 - 8.A.46.1.5
TC HRGMv2_0243_27 HRGMv2_0243_27_23 23403 26555 - 1.B.14.6.1
Gene ID: HRGMv2_0243_27_15
Type: CAZyme
Location: 11950 - 13143 (-)
Gene ID: HRGMv2_0243_27_16
Type: pfam
Location: 13161 - 13916 (-)
Gene ID: HRGMv2_0243_27_17
Type: TC
Location: 13972 - 15435 (-)
Gene ID: HRGMv2_0243_27_18
Type: pfam
Location: 15443 - 15784 (-)
Gene ID: HRGMv2_0243_27_19
Type: CAZyme
Location: 15799 - 17997 (-)
Gene ID: HRGMv2_0243_27_20
Type: CAZyme
Location: 17999 - 20119 (-)
Gene ID: HRGMv2_0243_27_21
Type: pfam
Location: 20186 - 21853 (-)
Gene ID: HRGMv2_0243_27_22
Type: TC
Location: 21879 - 23387 (-)
Gene ID: HRGMv2_0243_27_23
Type: TC
Location: 23403 - 26555 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List