dbCAN Logo

Genome Details

Selected Rep_genome_ID: CGMR099484
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola sartorii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR099484 4,685,837 98.5% 0.19% China Asia CGMR
HRGMv2_0151 4,949,693 98.4% 0.501% United Republic of Tanzania Africa HRGM
MGYG000004797 5,247,182 96.67% 0.85% China Asia UHGG
Rep_448 4,678,103 97.0248% 0.234962% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR099484_CGC52 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR099484_CGC76 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR099484_CGC48 CGCFAM_00002 Yes 21 13
CGMR099484_CGC15 CGCFAM_00025 Yes 11 4 pectin/alpha-glucan
CGMR099484_CGC61 CGCFAM_00089 Yes 7 1
CGMR099484_CGC36 CGCFAM_00158 Yes 10 2
CGMR099484_CGC19 CGCFAM_00194 Yes 21 10 host glycan
PUL0091_CGMR099484_C2 CGCFAM_00194 Yes 8 7 host glycan
PUL0092_CGMR099484_C0 CGCFAM_00194 Yes 10 6 host glycan
PUL0721_CGMR099484_C1 CGCFAM_00194 Yes 13 10 host glycan
CGMR099484_CGC9 CGCFAM_00229 Yes 6 1
CGMR099484_CGC56 CGCFAM_00265 Yes 3 1 beta-glucan
CGMR099484_CGC67 CGCFAM_00273 Yes 12 8 xylan
CGMR099484_CGC17 CGCFAM_00306 Yes 5 4
CGMR099484_CGC37 CGCFAM_00320 Yes 14 5
CGMR099484_CGC2 CGCFAM_00439 Yes 7 1 host glycan
CGMR099484_CGC30 CGCFAM_00633 Yes 10 1
CGMR099484_CGC58 CGCFAM_00670 Yes 6 1
CGMR099484_CGC11 CGCFAM_00940 Yes 12 8
CGMR099484_CGC44 CGCFAM_01267 Yes 5 3
CGMR099484_CGC53 CGCFAM_01268 Yes 15 8
CGMR099484_CGC62 CGCFAM_01484 Yes 8 4
PUL0687_CGMR099484_C1 CGCFAM_01804 Yes 6 3 xylan
CGMR099484_CGC72 CGCFAM_01809 Yes 19 12 pectin
PUL0723_CGMR099484_C0 CGCFAM_01809 Yes 16 11 pectin
Top CAZyme Families