Cluster: CGMR099484_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate: pectin/alpha-glucan
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_151180 | k141_151180_33 | 45163 | 47742 | - | GH13_10 |
| NULL(UNKNOWN) | k141_151180 | k141_151180_34 | 47832 | 49226 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_151180 | k141_151180_35 | 49271 | 50407 | - | SusE | SusF_SusE |
| TC | k141_151180 | k141_151180_36 | 50436 | 52130 | - | 8.A.46.1.1 |
| TC | k141_151180 | k141_151180_37 | 52143 | 55172 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_151180 | k141_151180_38 | 55340 | 55519 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_151180 | k141_151180_39 | 55572 | 57788 | - | GH97 |
| CAZyme | k141_151180 | k141_151180_40 | 57830 | 59680 | - | GH13_46 |
| pfam | k141_151180 | k141_151180_41 | 59928 | 61523 | + | DUF6377 |
| TC | k141_151180 | k141_151180_42 | 61590 | 62948 | - | 2.A.2.6.3 |
| CAZyme | k141_151180 | k141_151180_43 | 63023 | 65701 | - | GH77 |
Gene ID: k141_151180_33
Type: CAZyme
Location: 45163 - 47742 (-)
Type: CAZyme
Location: 45163 - 47742 (-)
Gene ID: k141_151180_34
Type:
Location: 47832 - 49226 (-)
Type:
Location: 47832 - 49226 (-)
Gene ID: k141_151180_35
Type: pfam
Location: 49271 - 50407 (-)
Type: pfam
Location: 49271 - 50407 (-)
Gene ID: k141_151180_36
Type: TC
Location: 50436 - 52130 (-)
Type: TC
Location: 50436 - 52130 (-)
Gene ID: k141_151180_37
Type: TC
Location: 52143 - 55172 (-)
Type: TC
Location: 52143 - 55172 (-)
Gene ID: k141_151180_38
Type:
Location: 55340 - 55519 (-)
Type:
Location: 55340 - 55519 (-)
Gene ID: k141_151180_39
Type: CAZyme
Location: 55572 - 57788 (-)
Type: CAZyme
Location: 55572 - 57788 (-)
Gene ID: k141_151180_40
Type: CAZyme
Location: 57830 - 59680 (-)
Type: CAZyme
Location: 57830 - 59680 (-)
Gene ID: k141_151180_41
Type: pfam
Location: 59928 - 61523 (+)
Type: pfam
Location: 59928 - 61523 (+)
Gene ID: k141_151180_42
Type: TC
Location: 61590 - 62948 (-)
Type: TC
Location: 61590 - 62948 (-)
Gene ID: k141_151180_43
Type: CAZyme
Location: 63023 - 65701 (-)
Type: CAZyme
Location: 63023 - 65701 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.