Cluster: CGMR099484_CGC67
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate: xylan
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_00273
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_35866 | k141_35866_14 | 13997 | 15463 | + | 2.A.2.3.4 |
| CAZyme | k141_35866 | k141_35866_15 | 15503 | 16630 | + | GH10 |
| CAZyme | k141_35866 | k141_35866_16 | 16643 | 17614 | + | GH43_1 |
| CAZyme | k141_35866 | k141_35866_17 | 17963 | 19699 | + | CBM91 | GH43_12 |
| TC | k141_35866 | k141_35866_18 | 19742 | 22813 | + | 1.B.14.6.1 |
| pfam | k141_35866 | k141_35866_19 | 22827 | 24761 | + | SusD_RagB | SusD-like_3 |
| TF | k141_35866 | k141_35866_20 | 25076 | 29116 | - | HTH_AraC |
| CAZyme | k141_35866 | k141_35866_21 | 29354 | 31861 | + | CBM6 | CE1 | GH43_29 |
| CAZyme | k141_35866 | k141_35866_22 | 31870 | 33453 | + | CBM91 | GH43_10 |
| CAZyme | k141_35866 | k141_35866_23 | 33466 | 36060 | + | GH115 |
| CAZyme | k141_35866 | k141_35866_24 | 36057 | 38102 | + | GH67 |
| CAZyme | k141_35866 | k141_35866_25 | 38130 | 40067 | + | CE20 | CE20 |
Gene ID: k141_35866_14
Type: TC
Location: 13997 - 15463 (+)
Type: TC
Location: 13997 - 15463 (+)
Gene ID: k141_35866_15
Type: CAZyme
Location: 15503 - 16630 (+)
Type: CAZyme
Location: 15503 - 16630 (+)
Gene ID: k141_35866_16
Type: CAZyme
Location: 16643 - 17614 (+)
Type: CAZyme
Location: 16643 - 17614 (+)
Gene ID: k141_35866_17
Type: CAZyme
Location: 17963 - 19699 (+)
Type: CAZyme
Location: 17963 - 19699 (+)
Gene ID: k141_35866_18
Type: TC
Location: 19742 - 22813 (+)
Type: TC
Location: 19742 - 22813 (+)
Gene ID: k141_35866_19
Type: pfam
Location: 22827 - 24761 (+)
Type: pfam
Location: 22827 - 24761 (+)
Gene ID: k141_35866_20
Type: TF
Location: 25076 - 29116 (-)
Type: TF
Location: 25076 - 29116 (-)
Gene ID: k141_35866_21
Type: CAZyme
Location: 29354 - 31861 (+)
Type: CAZyme
Location: 29354 - 31861 (+)
Gene ID: k141_35866_22
Type: CAZyme
Location: 31870 - 33453 (+)
Type: CAZyme
Location: 31870 - 33453 (+)
Gene ID: k141_35866_23
Type: CAZyme
Location: 33466 - 36060 (+)
Type: CAZyme
Location: 33466 - 36060 (+)
Gene ID: k141_35866_24
Type: CAZyme
Location: 36057 - 38102 (+)
Type: CAZyme
Location: 36057 - 38102 (+)
Gene ID: k141_35866_25
Type: CAZyme
Location: 38130 - 40067 (+)
Type: CAZyme
Location: 38130 - 40067 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.