Genome Details
Selected Rep_genome_ID: CGMR099484
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR099484 | 4,685,837 | 98.5% | 0.19% | China | Asia | CGMR |
| HRGMv2_0151 | 4,949,693 | 98.4% | 0.501% | United Republic of Tanzania | Africa | HRGM |
| MGYG000004797 | 5,247,182 | 96.67% | 0.85% | China | Asia | UHGG |
| Rep_448 | 4,678,103 | 97.0248% | 0.234962% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| PUL0724_CGMR099484_C0 | CGCFAM_01809 | Yes | 15 | 11 | pectin |
| CGMR099484_CGC14 | CGCFAM_02624 | Yes | 12 | 2 | |
| CGMR099484_CGC25 | CGCFAM_02719 | Yes | 4 | 1 | |
| CGMR099484_CGC39 | CGCFAM_02923 | Yes | 4 | 1 | |
| CGMR099484_CGC41 | CGCFAM_02933 | Yes | 4 | 1 | host glycan |
| CGMR099484_CGC23 | CGCFAM_03627 | Yes | 15 | 3 | |
| CGMR099484_CGC55 | CGCFAM_03628 | Yes | 22 | 10 | |
| CGMR099484_CGC42 | CGCFAM_03792 | Yes | 3 | 1 | |
| CGMR099484_CGC49 | CGCFAM_03937 | Yes | 3 | 1 | |
| CGMR099484_CGC28 | CGCFAM_04737 | Yes | 20 | 15 | |
| CGMR099484_CGC65 | CGCFAM_04742 | Yes | 11 | 5 | |
| CGMR099484_CGC6 | CGCFAM_05199 | Yes | 4 | 1 | |
| CGMR099484_CGC31 | CGCFAM_05200 | Yes | 32 | 17 | |
| CGMR099484_CGC63 | CGCFAM_07060 | Yes | 4 | 3 | |
| CGMR099484_CGC46 | CGCFAM_07914 | Yes | 8 | 4 | |
| CGMR099484_CGC22 | CGCFAM_07915 | Yes | 10 | 6 | |
| CGMR099484_CGC57 | CGCFAM_07916 | Yes | 17 | 9 | |
| CGMR099484_CGC32 | CGCFAM_07917 | Yes | 8 | 3 | |
| CGMR099484_CGC12 | CGCFAM_09200 | Yes | 9 | 1 | |
| CGMR099484_CGC27 | CGCFAM_09201 | Yes | 7 | 1 | |
| CGMR099484_CGC74 | CGCFAM_09205 | Yes | 18 | 10 |
Top CAZyme Families